RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 KCNJ10P78508 379 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 RBBP4Q09028 425 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 KRT72Q14CN4 511 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 NDUFAF6Q330K2 333 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 WIPI1Q5MNZ9 446 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 CALHM3Q86XJ0 350 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 PEX5LQ8IYB4 626 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ZZZ3Q8IYH5 903 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 FAM71CQ8NEG0 241 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 HOPXQ9BPY8 73 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 KLHDC3Q9BQ90 382 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 SPATA9Q9BWV2 254 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 TAGLN3Q9UI15 199 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ICAM5Q9UMF0 924 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 SLC35A3Q9Y2D2 325 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ZNF835Q9Y2P0 537 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 C15orf38-AP3S2A0A0A6YYH1 394 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 CLDN24A6NM45 220 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 EIF4E2O60573 245 aaKnown RBP18.59■□□□□ 0.57
HMGA2-211ENST00000545998 CSTAP01040 98 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 NID1P14543 1247 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 PGM1P36871 562 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 CPA2P48052 419 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 PLAURQ03405 335 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 RBPJQ06330 500 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 SKP2Q13309 424 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ARPINQ7Z6K5 226 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 C11orf65Q8NCR3 313 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 HIPK4Q8NE63 616 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 OR14L1PQ8NHC6 308 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 WDR60Q8WVS4 1066 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 ECSITQ9BQ95 431 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 LAT2Q9GZY6 243 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 EXO5Q9H790 373 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 CMTM6Q9NX76 183 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 SPRR3Q9UBC9 169 aa18.59■□□□□ 0.57
HMGA2-211ENST00000545998 OR14I1A6ND48 311 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 SLC19A2O60779 497 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 BCAS1O75363 584 aaPredicted RBP18.58■□□□□ 0.56
HMGA2-211ENST00000545998 ETS2P15036 469 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 IL7RP16871 459 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 PTGS2P35354 604 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 P2RX1P51575 399 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 ARSKQ6UWY0 536 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 Q6ZPB1 254 aaPredicted RBP18.58■□□□□ 0.56
HMGA2-211ENST00000545998 CMIPQ8IY22 773 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 OR52P1PQ8NH57 321 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF583Q96ND8 569 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 PIF1Q9H611 641 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 SLC6A5Q9Y345 797 aa18.58■□□□□ 0.56
HMGA2-211ENST00000545998 THBS1P07996 1170 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 HK1P19367 917 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 SUMO3P55854 103 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 EIF2S3LQ2VIR3 472 aaKnown RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 LIN52Q52LA3 116 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 NHSL2Q5HYW2 709 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 IFNEQ86WN2 208 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 VRK2Q86Y07 508 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 TNFRSF10DQ9UBN6 386 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 OSGIN2Q9Y236 505 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 ANGPT4Q9Y264 503 aa18.57■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF443Q9Y2A4 671 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 RPH3AQ9Y2J0 694 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 GPC6Q9Y625 555 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 USP9XQ93008 2570 aaPredicted RBP18.57■□□□□ 0.56
HMGA2-211ENST00000545998 A0A087WZY1 265 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 DNAJA2O60884 412 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 WISP1O95388 367 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 UBTFL6P0CB48 400 aaPredicted RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 ABOP16442 354 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 PCGF2P35227 344 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 GFRA1P56159 465 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 PCBP3P57721 371 aaKnown RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 B3GALT5-AS1P59052 145 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 EEF1A1P68104 462 aaKnown RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 GLYR1Q49A26 553 aaPredicted RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 MRPL2Q5T653 305 aaKnown RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 SLC30A8Q8IWU4 369 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 SLC15A3Q8IY34 581 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 TOR1AIP2Q8NFQ8 470 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 OR5W2Q8NH69 310 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 GPR119Q8TDV5 335 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 ARSGQ96EG1 525 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 REXO5Q96IC2 774 aaKnown RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 EXOSC3Q9NQT5 275 aaKnown RBP18.56■□□□□ 0.56
HMGA2-211ENST00000545998 MED17Q9NVC6 651 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 VDAC3Q9Y277 283 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 AP3M1Q9Y2T2 418 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 IFT52Q9Y366 437 aa18.56■□□□□ 0.56
HMGA2-211ENST00000545998 CCT8L1PA6NM43 557 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 NPIPA2E9PIF3 369 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 NPIPA3F8WFD2 350 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 STSP08842 583 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 PABPC4LP0CB38 370 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 TCEA1P23193 301 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 ZNF41P51814 821 aaPredicted RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 SLC7A2P52569 658 aa18.55■□□□□ 0.56
HMGA2-211ENST00000545998 CRYZQ08257 329 aaKnown RBP18.55■□□□□ 0.56
HMGA2-211ENST00000545998 LARS2Q15031 903 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms