RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 RASSF4Q9H2L5 321 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ANKRD19PQ9H560 264 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 DCLRE1BQ9H816 532 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 AURKCQ9UQB9 309 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 SH3GLB1Q9Y371 365 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 FAM32AQ9Y421 112 aaKnown RBP14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 ENPP4Q9Y6X5 453 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 PKD1L2Q7Z442 2459 aa14.65□□□□□ -0.06
PRPF40A-212ENST00000545856 CELSR3Q9NYQ7 3312 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 NPIPA5A0A0B4J1W7 369 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 TRAV17A0A0B4J275 112 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 NPIPA7E9PJI5 369 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 MASP2O00187 686 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 ADAMDEC1O15204 470 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 SLC25A12O75746 678 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 NPIPA8P0DM63 369 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 PGCP20142 388 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 TNFSF10P50591 281 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 P2RX1P51575 399 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 DLX5P56178 289 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 COPZ1P61923 177 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 ARG2P78540 354 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 CBFBQ13951 182 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 OR1C1Q15619 314 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 LINC00696Q6ZRV3 163 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 VTCN1Q7Z7D3 282 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 OR5W2Q8NH69 310 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 SCMH1Q96GD3 660 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF300Q96RE9 604 aaPredicted RBP14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 PTGES2Q9H7Z7 377 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 C12orf10Q9HB07 376 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 S100A14Q9HCY8 104 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 PPP4R1LQ9P1A2 415 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 ACAD8Q9UKU7 415 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 BOKQ9UMX3 212 aaPredicted RBP14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 CHST2Q9Y4C5 530 aa14.64□□□□□ -0.07
PRPF40A-212ENST00000545856 A0A087WZY1 265 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 CENPVL1A0A0U1RR11 272 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 A6NL46 340 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 KLRC4-KLRK1H3BQV0 150 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 TAF4O00268 1085 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ADAM10O14672 748 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 SNPHO15079 494 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 MGRN1O60291 552 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 NME2P1O60361 137 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 TPST1O60507 370 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 KRT36O76013 467 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 EPPINO95925 133 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 CNR1P21554 472 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 NME2P22392 152 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 PTGDSP41222 190 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 MAP2K6P52564 334 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 INAQ16352 499 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF613Q6PF04 617 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 APOOLQ6UXV4 268 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 OLIG3Q7RTU3 272 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ZDHHC21Q8IVQ6 265 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 CLIP4Q8N3C7 705 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ZADH2Q8N4Q0 377 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 B4GALNT2Q8NHY0 566 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 PHF10Q8WUB8 498 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 TMEM234Q8WY98 164 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF597Q96LX8 424 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 PRRC1Q96M27 445 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 SEPHS2Q99611 448 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 FAM173AQ9BQD7 235 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 CHID1Q9BWS9 393 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 OSBPL10Q9BXB5 764 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 ICAM5Q9UMF0 924 aa14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 TLN1Q9Y490 2541 aaKnown RBP14.63□□□□□ -0.07
PRPF40A-212ENST00000545856 HTR3EA5X5Y0 456 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ANKUB1A6NFN9 424 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ETV2O00321 342 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 HCRTR2O43614 444 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 OR5F1O95221 314 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 UBTFL6P0CB48 400 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 CCL3P10147 92 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FASP25445 335 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ITPKBP27987 946 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 HTR3AP46098 478 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF117Q03924 483 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 EPS8Q12929 822 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 CD226Q15762 336 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 TBR1Q16650 682 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF468Q5VIY5 522 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 SLC25A25Q6KCM7 469 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 MARCH3Q86UD3 253 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ZNF227Q86WZ6 799 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 PLCZ1Q86YW0 608 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 OFCC1Q8IZS5 231 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FAM86B1Q8N7N1 296 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FADS6Q8N9I5 356 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 FAM98AQ8NCA5 519 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 OR6T1Q8NGN1 323 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 OR5M3Q8NGP4 307 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 DNAJA4Q8WW22 397 aaPredicted RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 ST8SIA1Q92185 356 aa14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 CNOT9Q92600 299 aaKnown RBP14.62□□□□□ -0.07
PRPF40A-212ENST00000545856 BDH2Q9BUT1 245 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms