RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 CBLN3Q6UW01 205 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 ZNF550Q7Z398 422 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 OR2V1Q8NHB1 315 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 PPP1R14CQ8TAE6 165 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 PHOSPHO1Q8TCT1 267 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 ADAMTS15Q8TE58 950 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 MOAP1Q96BY2 351 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 PPP1R36Q96LQ0 422 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 WFIKKN1Q96NZ8 548 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 OR7D2Q96RA2 312 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 SORT1Q99523 831 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 SSU72Q9NP77 194 aaKnown RBP18.93■□□□□ 0.62
SCARB1-210ENST00000545493 NOP53Q9NZM5 478 aaKnown RBP18.93■□□□□ 0.62
SCARB1-210ENST00000545493 NDRG3Q9UGV2 375 aa18.93■□□□□ 0.62
SCARB1-210ENST00000545493 NUP214P35658 2090 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-210ENST00000545493 A0A0J9YW62 118 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ADAMDEC1O15204 470 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 RGS16O15492 202 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 SS18L1O75177 396 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 KRT16P08779 473 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 CD99P14209 185 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ATP6V1C1P21283 382 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ABCE1P61221 599 aaKnown RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 RPS26P62854 115 aaKnown RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 FOXD4Q12950 439 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 MAD2L1Q13257 205 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 NDUFAF6Q330K2 333 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 LSM12Q3MHD2 195 aaKnown RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ESPNLQ6ZVH7 1005 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 MTERF4Q7Z6M4 381 aaKnown RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 CLECL1Q8IZS7 167 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ZNF610Q8N9Z0 462 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 OR6K3Q8NGY3 331 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ZIM3Q96PE6 472 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 PRPF18Q99633 342 aaKnown RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 PARD6BQ9BYG5 372 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 AKTIPQ9H8T0 292 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 ELOVL5Q9NYP7 299 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 EDARQ9UNE0 448 aa18.92■□□□□ 0.62
SCARB1-210ENST00000545493 FAF1Q9UNN5 650 aaPredicted RBP18.92■□□□□ 0.62
SCARB1-210ENST00000545493 NID1P14543 1247 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 CD53P19397 219 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 KLK2P20151 261 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 CRYGSP22914 178 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 ELK4P28324 431 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 CLDN8P56748 225 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 KLHL26Q53HC5 615 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 TNFAIP8L3Q5GJ75 292 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 OR4F3Q6IEY1 312 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 KRTAP1-3Q8IUG1 177 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 CLEC4FQ8N1N0 589 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 GMPPAQ96IJ6 420 aaPredicted RBP18.91■□□□□ 0.62
SCARB1-210ENST00000545493 MARK4Q96L34 752 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 KLHL15Q96M94 604 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 PAQR5Q9NXK6 330 aaPredicted RBP18.91■□□□□ 0.62
SCARB1-210ENST00000545493 STOML1Q9UBI4 398 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 MCTS1Q9ULC4 181 aaKnown RBP18.91■□□□□ 0.62
SCARB1-210ENST00000545493 ICAM5Q9UMF0 924 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 CARD8Q9Y2G2 431 aa18.91■□□□□ 0.62
SCARB1-210ENST00000545493 RAI1Q7Z5J4 1906 aaPredicted RBP18.91■□□□□ 0.62
SCARB1-210ENST00000545493 RNF103-CHMP3A0A140T963 221 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 CASKO14936 926 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 TM9SF1O15321 606 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 BIRC5O15392 142 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 CFLARO15519 480 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 BGNP21810 368 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 KCNJ5P48544 419 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 MPP2Q14168 576 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 TOMM34Q15785 309 aaPredicted RBP18.9■□□□□ 0.62
SCARB1-210ENST00000545493 SMU1Q2TAY7 513 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 C22orf34Q6ZV56 151 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 ZNF527Q8NB42 609 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 ZBTB9Q96C00 473 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 ZNF524Q96C55 264 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 MED18Q9BUE0 208 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 PRRG4Q9BZD6 226 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 DLL4Q9NR61 685 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 RAB21Q9UL25 225 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 EMC9Q9Y3B6 208 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 RAP2CQ9Y3L5 183 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 ACANP16112 2415 aa18.9■□□□□ 0.62
SCARB1-210ENST00000545493 CENPVL1A0A0U1RR11 272 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 EFNA2O43921 213 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 DIAPH2O60879 1101 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 ME2P23368 584 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 LOXP28300 417 aaPredicted RBP18.89■□□□□ 0.61
SCARB1-210ENST00000545493 SFTPDP35247 375 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 P2RX1P51575 399 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 ATP12AP54707 1039 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 SUMO3P55854 103 aaPredicted RBP18.89■□□□□ 0.61
SCARB1-210ENST00000545493 PPP2R2AP63151 447 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 ADAM8P78325 824 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 ZNF239Q16600 458 aaKnown RBP18.89■□□□□ 0.61
SCARB1-210ENST00000545493 PGS1Q32NB8 556 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 HBMQ6B0K9 141 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 OLIG3Q7RTU3 272 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 ZNF614Q8N883 585 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 FBXO27Q8NI29 283 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 SLC35G5Q96KT7 338 aa18.89■□□□□ 0.61
SCARB1-210ENST00000545493 HS3ST6Q96QI5 342 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms