RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 AMY2BP19961 511 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 LSP1P33241 339 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 PEX19P40855 299 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 MAP3K8P41279 467 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 SESN3P58005 492 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 RCAN2Q14206 197 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 GANABQ14697 944 aaKnown RBP6.96□□□□□ -1.3
SNHG1-223ENST00000545440 MLC1Q15049 377 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 VPS26BQ4G0F5 336 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF385BQ569K4 471 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 TNFAIP8L3Q5GJ75 292 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 NSUN5P2Q63ZY6 315 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ANKRD26P1Q6NSI1 321 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 AAGABQ6PD74 315 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ENPP6Q6UWR7 440 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ETV3LQ6ZN32 361 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 SEM1Q6ZVN7 128 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF551Q7Z340 670 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-223ENST00000545440 YRDCQ86U90 279 aaKnown RBP6.96□□□□□ -1.3
SNHG1-223ENST00000545440 KIRREL3Q8IZU9 778 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 FADS6Q8N9I5 356 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 CDRT4Q8N9R6 151 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 OR4N2Q8NGD1 307 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 OR14L1PQ8NHC6 308 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 CEP70Q8NHQ1 597 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 CLHC1Q8NHS4 586 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 MBD3L2Q8NHZ7 208 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ABTB1Q969K4 478 aaPredicted RBP6.96□□□□□ -1.3
SNHG1-223ENST00000545440 WDYHV1Q96HA8 205 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 UCK2Q9BZX2 261 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 HHATLQ9HCP6 504 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ALKBH4Q9NXW9 302 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 TAS2R10Q9NYW0 307 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 SH3BP4Q9P0V3 963 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 PPP4R1LQ9P1A2 415 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 FBLN5Q9UBX5 448 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 ATP6V1HQ9UI12 483 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 DKKL1Q9UK85 242 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 FBXL2Q9UKC9 423 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 CAMK2AQ9UQM7 478 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 SLC6A5Q9Y345 797 aa6.96□□□□□ -1.3
SNHG1-223ENST00000545440 PDZD2O15018 2839 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CCDC168Q8NDH2 2452 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 AKAP6Q13023 2319 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 POLQO75417 2590 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 TCRBV5S2A0A599 114 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 B4DXG7 233 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 DVL2O14641 736 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CTIFO43310 598 aaKnown RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 AKAP10O43572 662 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SCO2O43819 266 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 FADS1O60427 444 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SKAP2O75563 359 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 NKX2-2O95096 273 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZWINTO95229 277 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 HSPA4LO95757 839 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SERPINE1P05121 402 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 NGFRP08138 427 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 MYZAPP0CAP1 466 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PRPS2P11908 318 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZNF708P17019 499 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CHMP24386 653 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CD40P25942 277 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CEACAM8P31997 349 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ASCL1P50553 236 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 MANFP55145 182 aaKnown RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 C21orf58P58505 322 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 MAD2L1Q13257 205 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 GAB1Q13480 694 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PTGR1Q14914 329 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SMU1Q2TAY7 513 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 FBXL19-AS1Q494R0 122 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 C6orf136Q5SQH8 315 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 CEP85LQ5SZL2 805 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 MFSD12Q6NUT3 480 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZCCHC12Q6PEW1 402 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SZRD1Q7Z422 152 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 WDR53Q7Z5U6 358 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 EXOC3L1Q86VI1 746 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 NUDCD3Q8IVD9 361 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 NATD1Q8N6N6 113 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 FNDC5Q8NAU1 212 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 RELL2Q8NC24 303 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 NAXEQ8NCW5 288 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 TNIP2Q8NFZ5 429 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 OR4K17Q8NGC6 315 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PSMA8Q8TAA3 256 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PPP1R14CQ8TAE6 165 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZPLD1Q8TCW7 415 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 GIMAP5Q96F15 307 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PGM2Q96G03 612 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 RMND5BQ96G75 393 aaPredicted RBP6.95□□□□□ -1.3
SNHG1-223ENST00000545440 PKNOX2Q96KN3 472 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 LURAP1Q96LR2 239 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 C3orf30Q96M34 536 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 SFXN2Q96NB2 322 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 ZFP3Q96NJ6 502 aa6.95□□□□□ -1.3
SNHG1-223ENST00000545440 C1orf50Q9BV19 199 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms