RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 H3BML4 177 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 KRT75O95678 551 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 PRF1P14222 555 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 TCEA1P23193 301 aaKnown RBP10.66□□□□□ -0.7
HDAC4-216ENST00000544989 P2RX1P51575 399 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 UFM1P61960 85 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 RAC1P63000 192 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 SORDQ00796 357 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 AP1ARQ63HQ0 302 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 SAXO2Q658L1 398 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 ARSKQ6UWY0 536 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 ZAR1Q86SH2 424 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 ANKRD46Q86W74 232 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 LIX1LQ8IVB5 337 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 C9orf106Q8NAJ2 232 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 NAXEQ8NCW5 288 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 PMM1Q92871 262 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 OTUB1Q96FW1 271 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF559Q9BR84 538 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 SLC35A5Q9BS91 424 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 OR51I1Q9H343 314 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 SDR39U1Q9NRG7 319 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-216ENST00000544989 FBXO34Q9NWN3 711 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 LIPT1Q9Y234 373 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 VDAC3Q9Y277 283 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
HDAC4-216ENST00000544989 USH1CQ9Y6N9 552 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 MED13LQ71F56 2210 aa10.66□□□□□ -0.7
HDAC4-216ENST00000544989 HCFC1P51610 2035 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 CCDC154A6NI56 674 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 EEF1E1-BLOC1S5C9J1V9 151 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 NPIPB9F8W1W9 429 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 RFXANKO14593 260 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 POLR3GO15318 223 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 EEF1E1O43324 174 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 DIAPH2O60879 1101 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 GOSR1O95249 250 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 NUDT14O95848 222 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 UBL4AP11441 157 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 H2AFXP16104 143 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 UQCRC1P31930 480 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 MRPL19P49406 292 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 PCYT1AP49585 367 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 STX1BP61266 288 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 PHC1P78364 1004 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 TLE4Q04727 773 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 MYBPHQ13203 477 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 CBFBQ13951 182 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF141Q15928 474 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 SGCBQ16585 318 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 PLPPR5Q32ZL2 321 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 SLC9B1Q4ZJI4 515 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 HEPHL1Q6MZM0 1159 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 ESPNLQ6ZVH7 1005 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 EIF3MQ7L2H7 374 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 UBQLNLQ8IYU4 475 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF295-AS1Q8N0V1 137 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 MIER2Q8N344 545 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 GATSQ8NAP1 163 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 RELL2Q8NC24 303 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 OR5D16Q8NGK9 328 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 NUDT8Q8WV74 236 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 XAGE5Q8WWM1 108 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 INTS12Q96CB8 462 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 SH3YL1Q96HL8 342 aaPredicted RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 DOCK7Q96N67 2140 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 ZNF350Q9GZX5 532 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 TIGARQ9NQ88 270 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 GLRX2Q9NS18 164 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 INTS9Q9NV88 658 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 TMEM45AQ9NWC5 275 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 THUMPD1Q9NXG2 353 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 JKAMPQ9P055 326 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 PRDM4Q9UKN5 801 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 PACSIN3Q9UKS6 424 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 MCTS1Q9ULC4 181 aaKnown RBP10.65□□□□□ -0.7
HDAC4-216ENST00000544989 SLC35A3Q9Y2D2 325 aa10.65□□□□□ -0.7
HDAC4-216ENST00000544989 SERINC4A6NH21 518 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 C17orf51A8MQB3 221 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 ZNF264O43296 627 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 SEC14L5O43304 696 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 KIAA0513O60268 411 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 SYNGR4O95473 234 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 PABPC4LP0CB38 370 aaKnown RBP10.64□□□□□ -0.71
HDAC4-216ENST00000544989 ZCCHC18P0CG32 403 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 OR12D1P0DN82 309 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 KIR2DL3P43628 341 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 CPA2P48052 419 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 NME5P56597 212 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 RPS26P62854 115 aaKnown RBP10.64□□□□□ -0.71
HDAC4-216ENST00000544989 PPP2R2AP63151 447 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 ZNF117Q03924 483 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 GNA13Q14344 377 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 CD226Q15762 336 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 TTMPQ5BVD1 217 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 GTF2IRD2BQ6EKJ0 949 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 POMZP3Q6PJE2 187 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 EPGNQ6UW88 154 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 ZNF621Q6ZSS3 439 aa10.64□□□□□ -0.71
HDAC4-216ENST00000544989 GTF2IRD2Q86UP8 949 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms