RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 OR7A17O14581 309 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 LTC4SQ16873 150 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 PLCXD3Q63HM9 321 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 ALKAL2Q6UX46 152 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 BRIX1Q8TDN6 353 aaKnown RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 DAZAP1Q96EP5 407 aaKnown RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 MICU1Q9BPX6 476 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 SLC6A16Q9GZN6 736 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 NAP1L6A6NFF2 107 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 SRPX2O60687 465 aaPredicted RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 CXADRP78310 365 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 HHEXQ03014 270 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 GK3PQ14409 553 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 APOOLQ6UXV4 268 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 SHISA6Q6ZSJ9 500 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 TMEM135Q86UB9 458 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 CNTNAP3Q9BZ76 1288 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 GLTPQ9NZD2 209 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 PCDHA9Q9Y5H5 950 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 PUS1Q9Y606 427 aaKnown RBP eCLIP14.55□□□□□ -0.08
CHD4-210ENST00000544040 A0A1W2PQ09 198 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 HLA-AP01891 365 aaKnown RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 BMP1P13497 986 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 SPCS2Q15005 226 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 B3GNT8Q7Z7M8 397 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 DNAJC22Q8N4W6 341 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 OR5AR1Q8NGP9 310 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 NANOS1Q8WY41 292 aaKnown RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 CA14Q9ULX7 337 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 PCDHGA1Q9Y5H4 931 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 ITGB8P26012 769 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 YIF1BQ5BJH7 314 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 TAS1R3Q7RTX0 852 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 NPWQ8N729 165 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 ZNF439Q8NDP4 499 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 ZNF417Q8TAU3 575 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 TMEM239Q8WW34 195 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 CDS1Q92903 461 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 MRPL38Q96DV4 380 aaKnown RBP14.55□□□□□ -0.08
CHD4-210ENST00000544040 SGK494L7N484 410 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 BHLHE40O14503 412 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 PINK1Q9BXM7 581 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 GFOD1Q9NXC2 390 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 CEPT1Q9Y6K0 416 aa14.55□□□□□ -0.08
CHD4-210ENST00000544040 A0A0B4J2A0 478 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ZNF487B1APH4 448 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 GPR37L1O60883 481 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 TAP2Q03519 686 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 RAB7BQ96AH8 199 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 MS4A4EQ96PG1 132 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ALOXE3Q9BYJ1 711 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ARHGAP39Q9C0H5 1083 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 TXNRD2Q9NNW7 524 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 SHPKQ9UHJ6 478 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 POLHQ9Y253 713 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 FAM183AA6NL82 134 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 PRAF2O60831 178 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 TXNDC12O95881 172 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 KCNJ8Q15842 424 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 NADSYN1Q6IA69 706 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ZNF704Q6ZNC4 412 aaPredicted RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 UMODL1-AS1Q8N2C9 162 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 SAP130Q9H0E3 1048 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ANKMY1Q9P2S6 941 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 SURF4O15260 269 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 CD6P30203 668 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ZNF789Q5FWF6 425 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ZNF705AQ6ZN79 300 aaPredicted RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 ABHD12BQ7Z5M8 362 aaPredicted RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 ZNF546Q86UE3 836 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 TBC1D20Q96BZ9 403 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 PAAF1Q9BRP4 392 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 GPR62Q9BZJ7 368 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 CRABP1P29762 137 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 AHRP35869 848 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 DEFA6Q01524 100 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 KCNIP4Q6PIL6 250 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 KANSL1Q7Z3B3 1105 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 GOLM1Q8NBJ4 401 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 ELP4Q96EB1 424 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 IGSF21Q96ID5 467 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 PRRT1Q99946 306 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 HEBP1Q9NRV9 189 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 MEGF11A6BM72 1044 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 A6NL46 340 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 LDB3O75112 727 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 DNAJB6O75190 326 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 STC2O76061 302 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 UBBP0CG47 229 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 UBCP0CG48 685 aaKnown RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 SPINT3P49223 89 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 UBE2KP61086 200 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 HABP2Q14520 560 aaPredicted RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 MKRN2Q9H000 416 aaKnown RBP14.54□□□□□ -0.08
CHD4-210ENST00000544040 RARRES3Q9UL19 164 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 V9GY05 133 aa14.54□□□□□ -0.08
CHD4-210ENST00000544040 C17orf113A0A1B0GUU1 675 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 ANKRD30BLA7E2S9 258 aa14.53□□□□□ -0.08
CHD4-210ENST00000544040 J3KTA2 159 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms