RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 ZC3HAV1LQ96H79 300 aaKnown RBP12.52□□□□□ -0.4
PPME1-208ENST00000543525 MYADMQ96S97 322 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 DCLRE1CQ96SD1 692 aaKnown RBP12.52□□□□□ -0.4
PPME1-208ENST00000543525 STACQ99469 402 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 ALG8Q9BVK2 526 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 EVA1AQ9H8M9 152 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 MARCH7Q9H992 704 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 CERS4Q9HA82 394 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 ADAP2Q9NPF8 381 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 DUSP22Q9NRW4 184 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 FBXL21Q9UKT6 434 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 SCML1Q9UN30 329 aa12.52□□□□□ -0.4
PPME1-208ENST00000543525 C2orf92A0A1B0GVN3 265 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 LRRC72A6NJI9 287 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 FAM25AB3EWG3 89 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 FAM25CB3EWG5 89 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 FAM25GB3EWG6 89 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 BHLHE40O14503 412 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 CTSVO60911 334 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 MAKP20794 623 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 TCEA1P23193 301 aaKnown RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 HTR2AP28223 471 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 MADCAM1Q13477 382 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 TCEA2Q15560 299 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 MAPK14Q16539 360 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 EXOSC6Q5RKV6 272 aaKnown RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 ZNF362Q5T0B9 420 aaPredicted RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 FCRL6Q6DN72 434 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 SMARCD3Q6STE5 483 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 TMEM91Q6ZNR0 172 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 LNX2Q8N448 690 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 SIMC1Q8NDZ2 872 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 RERGQ96A58 199 aaPredicted RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 CDCA3Q99618 268 aaPredicted RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 RNF32Q9H0A6 362 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 C14orf105Q9NVL8 296 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 RBFOX1Q9NWB1 397 aaKnown RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 ACTR10Q9NZ32 417 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 MALT1Q9UDY8 824 aa12.52□□□□□ -0.41
PPME1-208ENST00000543525 NUFIP1Q9UHK0 495 aaKnown RBP12.52□□□□□ -0.41
PPME1-208ENST00000543525 CENPVL1A0A0U1RR11 272 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 LYPD3O95274 346 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 ATP1B1P05026 303 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 GKN3PP0CG01 181 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 PRG2P13727 222 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 POLR2CP19387 275 aaPredicted RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 CD53P19397 219 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 PTNP21246 168 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 NT5EP21589 574 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 SNRPNP63162 240 aaKnown RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 ID2Q02363 134 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 ADAM15Q13444 863 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 COL9A2Q14055 689 aaPredicted RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 GALEQ14376 348 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 CDK10Q15131 360 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 SF3A2Q15428 464 aaKnown RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 TRAM1Q15629 374 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 AMZ1Q400G9 498 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 VASNQ6EMK4 673 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 PARM1Q6UWI2 310 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 TMPRSS11FQ6ZWK6 438 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 PFN4Q8NHR9 129 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 UBASH3BQ8TF42 649 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 RSC1A1Q92681 617 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 TSACCQ96A04 125 aaPredicted RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 TMEM43Q9BTV4 400 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 LMAN2LQ9H0V9 348 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 MED20Q9H944 212 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 ISG20L2Q9H9L3 353 aaKnown RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 TRIM36Q9NQ86 728 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 CLDND1Q9NY35 253 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 MED31Q9Y3C7 131 aa12.51□□□□□ -0.41
PPME1-208ENST00000543525 SNRNP200O75643 2136 aaKnown RBP12.51□□□□□ -0.41
PPME1-208ENST00000543525 SHISA3A0PJX4 238 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 CDHR4A6H8M9 788 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 OR6C74A6NCV1 312 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 SLC22A31A6NKX4 558 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 TTC36A6NLP5 189 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 PRR23D1E9PI22 279 aaPredicted RBP12.5□□□□□ -0.41
PPME1-208ENST00000543525 PLOD3O60568 738 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 DNAJB6O75190 326 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 TRIM3O75382 744 aaPredicted RBP12.5□□□□□ -0.41
PPME1-208ENST00000543525 RASGRP1O95267 797 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 GPR75O95800 540 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 MT-ND5P03915 603 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 YES1P07947 543 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 IFI6P09912 130 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 PRR23D2P0DMB1 279 aaPredicted RBP12.5□□□□□ -0.41
PPME1-208ENST00000543525 HOXB2P14652 356 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 F8A1P23610 371 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 POU6F2P78424 691 aaPredicted RBP12.5□□□□□ -0.41
PPME1-208ENST00000543525 P2RY14Q15391 338 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 GARNL3Q5VVW2 1013 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 WDR88Q6ZMY6 472 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 TRIM48Q8IWZ4 208 aa12.5□□□□□ -0.41
PPME1-208ENST00000543525 UBE2J2Q8N2K1 259 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms