RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 IFNEQ86WN2 208 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ARMC8Q8IUR7 673 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 CISD2Q8N5K1 135 aaKnown RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 TMEM251Q8N6I4 163 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 FAM71CQ8NEG0 241 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 OR2M3Q8NG83 312 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZG16BQ96DA0 208 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 SNRNP40Q96DI7 357 aaKnown RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 RNF145Q96MT1 663 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 BTBD10Q9BSF8 475 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 PINK1Q9BXM7 581 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 UBQLN3Q9H347 655 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 MUC13Q9H3R2 512 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZNF703Q9H7S9 590 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 KLHL28Q9NXS3 571 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 SEC14L3Q9UDX4 400 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 CD300AQ9UGN4 299 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 SLC13A4Q9UKG4 626 aa11.1□□□□□ -0.63
DDX55-210ENST00000543016 ZNF443Q9Y2A4 671 aaPredicted RBP11.1□□□□□ -0.63
DDX55-210ENST00000543016 IGSF10Q6WRI0 2623 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 ANKUB1A6NFN9 424 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 FAAHO00519 579 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 GNB5O14775 395 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 HCN1O60741 890 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 MFN2O95140 757 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 GDF1P27539 372 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 KDELR2P33947 212 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 EIF1P41567 113 aaKnown RBP11.09□□□□□ -0.63
DDX55-210ENST00000543016 EEF1A1P68104 462 aaKnown RBP11.09□□□□□ -0.63
DDX55-210ENST00000543016 CBFBQ13951 182 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 CD226Q15762 336 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 RPS26P11Q5JNZ5 115 aaPredicted RBP11.09□□□□□ -0.63
DDX55-210ENST00000543016 RINLQ6ZS11 566 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 CCDC121Q6ZUS5 278 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 ZNF550Q7Z398 422 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 SIAH3Q8IW03 269 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 OR5W2Q8NH69 310 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 FBXO27Q8NI29 283 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 CPT1CQ8TCG5 803 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 SLC26A7Q8TE54 656 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 TMEM234Q8WY98 164 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 LZICQ8WZA0 190 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 GNRHR2Q96P88 292 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 SLX1AQ9BQ83 275 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 RTN4RQ9BZR6 473 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 OR2B2Q9GZK3 357 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 MMADHCQ9H3L0 296 aaPredicted RBP11.09□□□□□ -0.63
DDX55-210ENST00000543016 DSN1Q9H410 356 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 PIF1Q9H611 641 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 LUZP4Q9P127 313 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 MAGEL2Q9UJ55 1249 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 BAG5Q9UL15 447 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 ICAM5Q9UMF0 924 aa11.09□□□□□ -0.63
DDX55-210ENST00000543016 C7orf72A4D263 438 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 CXCR6O00574 342 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 SUSD5O60279 629 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 IGHG3P01860 377 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 EDN3P14138 238 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 GGT1P19440 569 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 PGCP20142 388 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 DPP4P27487 766 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ADH6P28332 368 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.64
DDX55-210ENST00000543016 ZNF117Q03924 483 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 SKP2Q13309 424 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 MRPL2Q5T653 305 aaKnown RBP11.08□□□□□ -0.64
DDX55-210ENST00000543016 OLIG3Q7RTU3 272 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 VRK2Q86Y07 508 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 EID3Q8N140 333 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 GHDCQ8N2G8 530 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ZNF843Q8N446 348 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 GATSQ8NAP1 163 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 OR52E4Q8NGH9 312 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ST8SIA1Q92185 356 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ZBTB8AQ96BR9 441 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 SLC7A6OSQ96CW6 309 aaPredicted RBP11.08□□□□□ -0.64
DDX55-210ENST00000543016 C1GALT1C1Q96EU7 318 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 GPR137Q96N19 417 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 QRSL1Q9H0R6 528 aaKnown RBP11.08□□□□□ -0.64
DDX55-210ENST00000543016 GORASP2Q9H8Y8 452 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 ADPRHL2Q9NX46 363 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 MED11Q9P086 117 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 STOML1Q9UBI4 398 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 DKKL1Q9UK85 242 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 CARD8Q9Y2G2 431 aa11.08□□□□□ -0.64
DDX55-210ENST00000543016 CENPVL1A0A0U1RR11 272 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 A0A1B0GVC2 190 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 C2orf72A6NCS6 295 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 OR14I1A6ND48 311 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 CFAP73A6NFT4 308 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 FAM166BA8MTA8 275 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 NPIPA5E9PKD4 350 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 ETV2O00321 342 aaPredicted RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 GCM2O75603 506 aaPredicted RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 TRAPPC6AO75865 159 aa11.07□□□□□ -0.64
DDX55-210ENST00000543016 DNAJC8O75937 253 aaPredicted RBP11.07□□□□□ -0.64
DDX55-210ENST00000543016 STAMBPO95630 424 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms