RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ZNF322Q6U7Q0 402 aaPredicted RBP6.08□□□□□ -1.44
PTPRO-208ENST00000542557 TMPRSS11FQ6ZWK6 438 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 SHFQ7M4L6 423 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 CA13Q8N1Q1 262 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 LNX2Q8N448 690 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 CELF2-AS1Q8N7Q2 184 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM52Q8NDY8 209 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 OR4F15Q8NGB8 312 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 DNAJA4Q8WW22 397 aaPredicted RBP6.08□□□□□ -1.44
PTPRO-208ENST00000542557 CD180Q99467 661 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 TM9SF2Q99805 663 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 GSDMCQ9BYG8 508 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 MIR1-1HGQ9H1L0 117 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 INPP5EQ9NRR6 644 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 TOR4AQ9NXH8 423 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 SIDT1Q9NXL6 827 aaKnown RBP6.08□□□□□ -1.44
PTPRO-208ENST00000542557 H2AFY2Q9P0M6 372 aaPredicted RBP6.08□□□□□ -1.44
PTPRO-208ENST00000542557 MUTYHQ9UIF7 546 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 CSNK1G3Q9Y6M4 447 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 PIAS3Q9Y6X2 628 aa6.08□□□□□ -1.44
PTPRO-208ENST00000542557 TRBV23OR9-2A0A075B6M9 112 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 A0A1W2PQ09 198 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF860A6NHJ4 632 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RFXAPO00287 272 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 POLR1CO15160 346 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RCBTB2O95199 551 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 LALBAP00709 142 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TRAPPC2P0DI81 140 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TRAPPC2BP0DI82 140 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PRG2P13727 222 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TBXA2RP21731 343 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CD79BP40259 229 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RPS5P46782 204 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TGM4P49221 684 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 FXYD6P3P58550 94 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 POU6F2P78424 691 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SHC2P98077 582 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TCEA2Q15560 299 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 BAK1Q16611 211 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZMAT1Q5H9K5 638 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 VASNQ6EMK4 673 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF544Q6NX49 715 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 METAP1DQ6UB28 335 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 FAM131AQ6UXB0 335 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TMEM92Q6UXU6 159 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 WDR88Q6ZMY6 472 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PRR23CQ6ZRP0 262 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 Q6ZSR6 202 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 NRARPQ7Z6K4 114 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 LHFPL3Q86UP9 236 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 GRAMD2AQ8IUY3 354 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 UBQLNLQ8IYU4 475 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SIRT6Q8N6T7 355 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CSNK1A1LQ8N752 337 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SYT14Q8NB59 555 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 BBS1Q8NFJ9 593 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC35B4Q969S0 331 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ABHD8Q96I13 439 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SECISBP2Q96T21 854 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF559Q9BR84 538 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TPK1Q9H3S4 243 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC28A3Q9HAS3 691 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CMC2Q9NRP2 79 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 TNFRSF10DQ9UBN6 386 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 KCNE5Q9UJ90 142 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MKL2Q9ULH7 1088 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SCN3AQ9NY46 2000 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 FABP12A6NFH5 140 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PEX12O00623 359 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SOCS6O14544 535 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SSX4O60224 188 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 LDB3O75112 727 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC2A10O95528 541 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SEMA4FO95754 770 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 HLA-DQB1P01920 261 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC35E2P0CK97 266 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 IFI30P13284 250 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RAC2P15153 192 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 BMP7P18075 431 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MAKP20794 623 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PAICSP22234 425 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CAPZA2P47755 286 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RFX2P48378 723 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 OR2B6P58173 313 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ID2Q02363 134 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 FZD5Q13467 585 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 RIN1Q13671 783 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZSWIM7Q19AV6 140 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 AMZ1Q400G9 498 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PLBD1Q6P4A8 553 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ZNF517Q6ZMY9 492 aaPredicted RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 MEPCEQ7L2J0 689 aaKnown RBP6.07□□□□□ -1.44
PTPRO-208ENST00000542557 PRSS41Q7RTY9 318 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 OOSP2Q86WS3 158 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 CPOQ8IVL8 374 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SLC22A18ASQ8N1D0 253 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 ACBD7Q8N6N7 88 aa6.07□□□□□ -1.44
PTPRO-208ENST00000542557 SCAIQ8N9R8 606 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms