RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 ZNF440Q8IYI8 595 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 OR1J4Q8NGS1 313 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 SLC35B4Q969S0 331 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 DTNBP1Q96EV8 351 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 JSRP1Q96MG2 331 aaPredicted RBP21.1■□□□□ 0.97
HOMER3-205ENST00000542541 LAT2Q9GZY6 243 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 SLC25A18Q9H1K4 315 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 EXPH5Q8NEV8 1989 aa21.1■□□□□ 0.97
HOMER3-205ENST00000542541 IGLV3-32A0A0A0MS00 114 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 CFAP73A6NFT4 308 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 TPST1O60507 370 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 FESP07332 822 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 UBTFL6P0CB48 400 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-205ENST00000542541 RNF144AP50876 292 aaPredicted RBP21.09■□□□□ 0.97
HOMER3-205ENST00000542541 C1orf146Q5VVC0 180 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 TIGD3Q6B0B8 471 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 PLCZ1Q86YW0 608 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 CLIP4Q8N3C7 705 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 UTP4Q969X6 686 aaKnown RBP21.09■□□□□ 0.97
HOMER3-205ENST00000542541 TPD52L3Q96J77 140 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 MFRPQ9BY79 579 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 ZFP64Q9NPA5 681 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 EXOSC3Q9NQT5 275 aaKnown RBP21.09■□□□□ 0.97
HOMER3-205ENST00000542541 OLAHQ9NV23 265 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 RLIMQ9NVW2 624 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 CARD8Q9Y2G2 431 aa21.09■□□□□ 0.97
HOMER3-205ENST00000542541 ADAM10O14672 748 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 SNPHO15079 494 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 CYP7B1O75881 506 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 CD247P20963 164 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 FAM71CQ8NEG0 241 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 TOR1AIP2Q8NFQ8 470 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 B4GALNT2Q8NHY0 566 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 CNOT9Q92600 299 aaKnown RBP21.08■□□□□ 0.97
HOMER3-205ENST00000542541 PNPLA2Q96AD5 504 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 PTGES2Q9H7Z7 377 aa21.08■□□□□ 0.97
HOMER3-205ENST00000542541 TUBA8Q9NY65 449 aaPredicted RBP21.08■□□□□ 0.97
HOMER3-205ENST00000542541 GNB5O14775 395 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 LGI1O95970 557 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 NQO1P15559 274 aaKnown RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ATP6V1B2P21281 511 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 MEOX1P50221 254 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ZNF117Q03924 483 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SKP2Q13309 424 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 OR5M10Q6IEU7 315 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 RPUSD3Q6P087 351 aaKnown RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 FKBP9P1Q75LS8 142 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ZNF771Q7L3S4 317 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ZNF550Q7Z398 422 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 TMCO5AQ8N6Q1 288 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 WDSUB1Q8N9V3 476 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 DNAJB12Q9NXW2 375 aaKnown RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 B4GALT7Q9UBV7 327 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SLC9A8Q9Y2E8 581 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 CHST2Q9Y4C5 530 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 A0A0G2JMM0 328 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 A0A1W2PPB8 328 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 A0A1W2PRS3 328 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 AQP12BA6NM10 295 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 KIR3DP1A8MWS1 328 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 CBR3O75828 277 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 P2RX1P51575 399 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SUMO3P55854 103 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SLC6A19Q695T7 634 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 AQP12AQ8IXF9 295 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 TEX19Q8NA77 164 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ZFP62Q8NB50 900 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 GPR32P1Q8NGA4 272 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 OR4K17Q8NGC6 315 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SH3YL1Q96HL8 342 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 RSPO3Q9BXY4 272 aaPredicted RBP21.07■□□□□ 0.96
HOMER3-205ENST00000542541 PRDM4Q9UKN5 801 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 ICAM5Q9UMF0 924 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 SH3GLB1Q9Y371 365 aa21.07■□□□□ 0.96
HOMER3-205ENST00000542541 RASAL1O95294 804 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 UQCRBP14927 111 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 SLC6A8P48029 635 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 PLGLB1Q02325 96 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 FOXO1Q12778 655 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 INAQ16352 499 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 PLEKHN1Q494U1 663 aaPredicted RBP21.06■□□□□ 0.96
HOMER3-205ENST00000542541 GLIPR1L2Q4G1C9 344 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 CBLN3Q6UW01 205 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 PYURFQ96I23 114 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 DSN1Q9H410 356 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 MED11Q9P086 117 aa21.06■□□□□ 0.96
HOMER3-205ENST00000542541 PRKD3O94806 890 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 CCR4P51679 360 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 INPP5JQ15735 1006 aaPredicted RBP21.05■□□□□ 0.96
HOMER3-205ENST00000542541 NDUFAF6Q330K2 333 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 IFI44LQ53G44 452 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 FADS6Q8N9I5 356 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 OR2M3Q8NG83 312 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 OR5W2Q8NH69 310 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 HSH2DQ96JZ2 352 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 GNRHR2Q96P88 292 aa21.05■□□□□ 0.96
HOMER3-205ENST00000542541 TNRC6AQ8NDV7 1962 aaKnown RBP21.05■□□□□ 0.96
HOMER3-205ENST00000542541 PINLYPA6NC86 204 aa21.04■□□□□ 0.96
HOMER3-205ENST00000542541 TMEM229AB2RXF0 380 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms