RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 A8MV72 311 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 E5RI56 91 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 H0YGG7 62 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 GFYI3L273 518 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 PGRMC1O00264 195 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 MAP2K7O14733 419 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 KIF5CO60282 957 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 ALOX12BO75342 701 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 VPS26AO75436 327 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 SLC16A8O95907 504 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CATP04040 527 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 HIST1H2ABP04908 130 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 F7P08709 466 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 RNF224P0DH78 156 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 HIST1H2ADP20671 130 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 ITGA3P26006 1051 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CMPK1P30085 196 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 RPA3P35244 121 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 SLC1A2P43004 574 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 MSH2P43246 934 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 FNTAP49354 379 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 TERF1P54274 439 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 RELAQ04206 551 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 PRDX1Q06830 199 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 KLC1Q07866 573 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 RBBP7Q16576 425 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 TTLL9Q3SXZ7 439 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 GARNL3Q5VVW2 1013 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CCDC137Q6PK04 289 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 SUSD1Q6UWL2 747 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CYHR1Q6ZMK1 362 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 SHISA6Q6ZSJ9 500 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 HIST3H2AQ7L7L0 130 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 LMNTD2Q8IXW0 634 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 OR8H2Q8N162 312 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 ZADH2Q8N4Q0 377 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CSNK1A1LQ8N752 337 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 NAT8LQ8N9F0 302 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CD200R1Q8TD46 325 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 PPP4R1Q8TF05 950 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 TANKQ92844 425 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 TAAR8Q969N4 342 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 ERP27Q96DN0 273 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 OR2A5Q96R48 311 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 NAP1L3Q99457 506 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 MTERF1Q99551 399 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 PKP4Q99569 1192 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 MRPS30Q9NP92 439 aaKnown RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 FBXO6Q9NRD1 293 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 PLSCR4Q9NRQ2 329 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 STOX2Q9P2F5 926 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 ZNF282Q9UDV7 671 aaPredicted RBP7.44□□□□□ -1.22
MRPS35-204ENST00000542199 CELSR1Q9NYQ6 3014 aa7.44□□□□□ -1.22
MRPS35-204ENST00000542199 MDC1Q14676 2089 aaKnown RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CSMD2Q7Z408 3487 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MTORP42345 2549 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 IGLV5-37A0A075B6J1 123 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CTAGE9A4FU28 777 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 GOLGA8MH3BSY2 632 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MITFO75030 526 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 HPP00738 406 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MPC1LP0DKB6 136 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ERVK-10P10266 1014 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MMP9P14780 707 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 EZRP15311 586 aaKnown RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 TNFRSF8P28908 595 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 IMPA1P29218 277 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 SLC26A3P40879 764 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 FOXG1P55316 489 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CLDN20P56880 219 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ZNF155Q12901 538 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CUL1Q13616 776 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 HKDC1Q2TB90 917 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 RNASEH2BQ5TBB1 312 aaKnown RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 AGAP7PQ5VUJ5 663 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 GALNT5Q7Z7M9 940 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CCDC190Q86UF4 302 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 GLCCI1Q86VQ1 547 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ODF3L1Q8IXM7 274 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 AMER3Q8N944 861 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 OR5R1Q8NH85 324 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ACTRT1Q8TDG2 376 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 SSC4DQ8WTU2 575 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CABS1Q96KC9 395 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 AGAP4Q96P64 663 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 PAFAH2Q99487 392 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 GPR21Q99679 349 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ILKAPQ9H0C8 392 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MAGIXQ9H6Y5 334 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 C20orf96Q9NUD7 363 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 ASF1BQ9NVP2 202 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 TAC3Q9UHF0 121 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 C3orf18Q9UK00 162 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 FBXO5Q9UKT4 447 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 NTNG1Q9Y2I2 539 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 DHRS7Q9Y394 339 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 CSAG2Q9Y5P2 127 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 MAP1AP78559 2803 aaPredicted RBP7.43□□□□□ -1.22
MRPS35-204ENST00000542199 HEATR5BQ9P2D3 2071 aa7.43□□□□□ -1.22
MRPS35-204ENST00000542199 IDSB3KWA1 339 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms