RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 KLHDC8BQ8IXV7 354 aa15.05■□□□□ -0
VARS2-212ENST00000542001 ARL14Q8N4G2 192 aa15.05■□□□□ -0
VARS2-212ENST00000542001 KCNE1BA0A087WTH5 132 aa15.04■□□□□ -0
VARS2-212ENST00000542001 IFNA6P05013 189 aa15.04■□□□□ -0
VARS2-212ENST00000542001 RPS27P42677 84 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 SLC1A3P43003 542 aa15.04■□□□□ -0
VARS2-212ENST00000542001 EPHA5P54756 1037 aa15.04■□□□□ -0
VARS2-212ENST00000542001 AGAP6Q5VW22 663 aa15.04■□□□□ -0
VARS2-212ENST00000542001 GID4Q8IVV7 300 aa15.04■□□□□ -0
VARS2-212ENST00000542001 OR5W2Q8NH69 310 aa15.04■□□□□ -0
VARS2-212ENST00000542001 TMEM163Q8TC26 289 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SGTBQ96EQ0 304 aa15.04■□□□□ -0
VARS2-212ENST00000542001 CNRIP1Q96F85 164 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 AGAP4Q96P64 663 aa15.04■□□□□ -0
VARS2-212ENST00000542001 LRRC3BQ96PB8 259 aa15.04■□□□□ -0
VARS2-212ENST00000542001 NRSN2Q9GZP1 204 aa15.04■□□□□ -0
VARS2-212ENST00000542001 OR52A5Q9H2C5 316 aa15.04■□□□□ -0
VARS2-212ENST00000542001 TMEM38AQ9H6F2 299 aa15.04■□□□□ -0
VARS2-212ENST00000542001 CNOT2Q9NZN8 540 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 ACOD1A6NK06 481 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SSX4O60224 188 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SPNP16150 400 aa15.04■□□□□ -0
VARS2-212ENST00000542001 MAZP56270 477 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 DUSP5Q16690 384 aa15.04■□□□□ -0
VARS2-212ENST00000542001 TATDN3Q17R31 274 aa15.04■□□□□ -0
VARS2-212ENST00000542001 ACSM3Q53FZ2 586 aa15.04■□□□□ -0
VARS2-212ENST00000542001 ZNF782Q6ZMW2 699 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 GDPD3Q7L5L3 318 aa15.04■□□□□ -0
VARS2-212ENST00000542001 PFN4Q8NHR9 129 aa15.04■□□□□ -0
VARS2-212ENST00000542001 RNF121Q9H920 327 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SESN1Q9Y6P5 492 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SLC22A31A6NKX4 558 aa15.04■□□□□ -0
VARS2-212ENST00000542001 M0R082 166 aa15.04■□□□□ -0
VARS2-212ENST00000542001 MEN1O00255 615 aa15.04■□□□□ -0
VARS2-212ENST00000542001 GABRPO00591 440 aa15.04■□□□□ -0
VARS2-212ENST00000542001 NRG2O14511 850 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 TSPAN4O14817 238 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SNRPBP14678 240 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 C4BPBP20851 252 aa15.04■□□□□ -0
VARS2-212ENST00000542001 HTR2BP41595 481 aa15.04■□□□□ -0
VARS2-212ENST00000542001 OXA1LQ15070 435 aa15.04■□□□□ -0
VARS2-212ENST00000542001 AVL9Q8NBF6 648 aa15.04■□□□□ -0
VARS2-212ENST00000542001 METTL2AQ96IZ6 378 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 COQ10AQ96MF6 247 aa15.04■□□□□ -0
VARS2-212ENST00000542001 SGPP1Q9BX95 441 aa15.04■□□□□ -0
VARS2-212ENST00000542001 C6orf106Q9H6K1 298 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 ACSS1Q9NUB1 689 aaPredicted RBP15.04■□□□□ -0
VARS2-212ENST00000542001 CPNE7Q9UBL6 633 aa15.04■□□□□ -0
VARS2-212ENST00000542001 MRTO4Q9UKD2 239 aaKnown RBP15.04■□□□□ -0
VARS2-212ENST00000542001 ITGA10O75578 1167 aa15.03■□□□□ -0
VARS2-212ENST00000542001 CD2P06729 351 aa15.03■□□□□ -0
VARS2-212ENST00000542001 RAB3BP20337 219 aa15.03■□□□□ -0
VARS2-212ENST00000542001 STARP49675 285 aa15.03■□□□□ -0
VARS2-212ENST00000542001 ARFIP1P53367 373 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PPP2CBP62714 309 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PPP2CAP67775 309 aa15.03■□□□□ -0
VARS2-212ENST00000542001 FGFBP1Q14512 234 aa15.03■□□□□ -0
VARS2-212ENST00000542001 SLC35B4Q969S0 331 aa15.03■□□□□ -0
VARS2-212ENST00000542001 DPCDQ9BVM2 203 aaPredicted RBP15.03■□□□□ -0
VARS2-212ENST00000542001 ZNF443Q9Y2A4 671 aaPredicted RBP15.03■□□□□ -0
VARS2-212ENST00000542001 CDH10Q9Y6N8 788 aa15.03■□□□□ -0
VARS2-212ENST00000542001 CASP3P42574 277 aa15.03■□□□□ -0
VARS2-212ENST00000542001 TSPAN5P62079 268 aa15.03■□□□□ -0
VARS2-212ENST00000542001 GBX1Q14549 363 aa15.03■□□□□ -0
VARS2-212ENST00000542001 TMEM240Q5SV17 173 aa15.03■□□□□ -0
VARS2-212ENST00000542001 ANKRD54Q6NXT1 300 aa15.03■□□□□ -0
VARS2-212ENST00000542001 RASSF6Q6ZTQ3 369 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PHC2Q8IXK0 858 aa15.03■□□□□ -0
VARS2-212ENST00000542001 FAM160A2Q8N612 972 aaPredicted RBP15.03■□□□□ -0
VARS2-212ENST00000542001 MOAP1Q96BY2 351 aa15.03■□□□□ -0
VARS2-212ENST00000542001 TOE1Q96GM8 510 aaKnown RBP15.03■□□□□ -0
VARS2-212ENST00000542001 PLA2G12AQ9BZM1 189 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PPIL3Q9H2H8 161 aaKnown RBP15.03■□□□□ -0
VARS2-212ENST00000542001 MUTYHQ9UIF7 546 aa15.03■□□□□ -0
VARS2-212ENST00000542001 CFIP05156 583 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PRKCAP17252 672 aa15.03■□□□□ -0
VARS2-212ENST00000542001 VAMP1P23763 118 aa15.03■□□□□ -0
VARS2-212ENST00000542001 TEAD1P28347 426 aa15.03■□□□□ -0
VARS2-212ENST00000542001 BSGP35613 385 aa15.03■□□□□ -0
VARS2-212ENST00000542001 FNTBP49356 437 aa15.03■□□□□ -0
VARS2-212ENST00000542001 RACK1P63244 317 aaKnown RBP15.03■□□□□ -0
VARS2-212ENST00000542001 NSDHLQ15738 373 aa15.03■□□□□ -0
VARS2-212ENST00000542001 LILRA6Q6PI73 481 aa15.03■□□□□ -0
VARS2-212ENST00000542001 ESPNLQ6ZVH7 1005 aa15.03■□□□□ -0
VARS2-212ENST00000542001 HCAR2Q8TDS4 363 aa15.03■□□□□ -0
VARS2-212ENST00000542001 MS4A6EQ96DS6 147 aa15.03■□□□□ -0
VARS2-212ENST00000542001 FAM83CQ9BQN1 747 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PBX4Q9BYU1 374 aa15.03■□□□□ -0
VARS2-212ENST00000542001 C11orf54Q9H0W9 315 aaPredicted RBP15.03■□□□□ -0
VARS2-212ENST00000542001 WDR87Q6ZQQ6 2873 aa15.03■□□□□ -0
VARS2-212ENST00000542001 APC2O95996 2303 aa15.03■□□□□ -0
VARS2-212ENST00000542001 PARP14Q460N5 1801 aa15.03■□□□□ -0
VARS2-212ENST00000542001 KDM4BO94953 1096 aa15.02■□□□□ -0
VARS2-212ENST00000542001 STOMP27105 288 aa15.02■□□□□ -0
VARS2-212ENST00000542001 SSTR2P30874 369 aa15.02■□□□□ -0
VARS2-212ENST00000542001 ADAM8P78325 824 aa15.02■□□□□ -0
VARS2-212ENST00000542001 OC90Q02509 493 aaPredicted RBP15.02■□□□□ -0
VARS2-212ENST00000542001 CASTOR1Q8WTX7 329 aa15.02■□□□□ -0
VARS2-212ENST00000542001 CNOT9Q92600 299 aaKnown RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms