RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 TRBV5-3A0A0A0MS03 114 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 GXYLT2A0PJZ3 443 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 KDM4EB2RXH2 506 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 ANGPT2O15123 496 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 SMPD2O60906 423 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 UGT2B11O75310 529 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 REM1O75628 298 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 KCNK2O95069 426 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 NPPAP01160 153 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 GSNP06396 782 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 GUSBP08236 651 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 PPIBP23284 216 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 IL12BP29460 328 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 ANXA11P50995 505 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 MVDP53602 400 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 POU6F2P78424 691 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 SNTA1Q13424 505 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 GKAP1Q5VSY0 366 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 AP1ARQ63HQ0 302 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 DLEU7Q6UYE1 221 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 SEM1Q6ZVN7 128 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 MTDHQ86UE4 582 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 RETREG3Q86VR2 466 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 CLEC4FQ8N1N0 589 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 COX18Q8N8Q8 333 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 FAM13CQ8NE31 585 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 RP9Q8TA86 221 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 PIK3R3Q92569 461 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 JADE3Q92613 823 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 COL21A1Q96P44 957 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 OR7D2Q96RA2 312 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 ADOQ96SZ5 270 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 G6PC3Q9BUM1 346 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 OR51I1Q9H343 314 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 RAD21L1Q9H4I0 556 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 SERHL2Q9H4I8 314 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 TPT1P8Q9HAU6 139 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 EXD2Q9NVH0 621 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 THUMPD1Q9NXG2 353 aaKnown RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 SLC25A37Q9NYZ2 338 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 ARMCX1Q9P291 453 aa7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 FOXD3Q9UJU5 478 aaPredicted RBP7.9□□□□□ -1.14
CLSTN3-212ENST00000541770 FLNAP21333 2647 aaKnown RBP7.9□□□□□ -1.15
CLSTN3-212ENST00000541770 CLIC1O00299 241 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 FBP2O00757 339 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CASKO14936 926 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 RRP9O43818 475 aaKnown RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 TRAPPC6AO75865 159 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 DCTN3O75935 186 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 SNX4O95219 450 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 IGKV1D-16P01601 117 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 NGFRP08138 427 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 RFPL3SP0C7P2 107 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 GDF1P27539 372 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 PRDX6P30041 224 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CASP3P42574 277 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 KHKP50053 298 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ZNF136P52737 540 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 RPS26P62854 115 aaKnown RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 FOXO1Q12778 655 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 FADDQ13158 208 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 STX5Q13190 355 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CYLC2Q14093 348 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 HYAL4Q2M3T9 481 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ARHGAP11BQ3KRB8 267 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 GTDC1Q4AE62 458 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 DCST2Q5T1A1 773 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ATAD3BQ5T9A4 648 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 FAM91A1Q658Y4 838 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 HEPHL1Q6MZM0 1159 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 SLC30A6Q6NXT4 461 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 TNFAIP8L2Q6P589 184 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 DHDDSQ86SQ9 333 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 SNX32Q86XE0 403 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 RNF130Q86XS8 419 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 MSRB3Q8IXL7 192 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 OR5D16Q8NGK9 328 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 NEIL3Q8TAT5 605 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 FBXO30Q8TB52 745 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CDS1Q92903 461 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 EFHD2Q96C19 240 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 COX4I2Q96KJ9 171 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 TRIB1Q96RU8 372 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 NODALQ96S42 347 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 SDF2Q99470 211 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 BDH2Q9BUT1 245 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ANGPTL4Q9BY76 406 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 PROK2Q9HC23 129 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 POLE3Q9NRF9 147 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 VAPAQ9P0L0 249 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 SLAMF8Q9P0V8 285 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ZNF629Q9UEG4 869 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 BOKQ9UMX3 212 aaPredicted RBP7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 ABCG2Q9UNQ0 655 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CORO2BQ9UQ03 480 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 CAMK2AQ9UQM7 478 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 KCNE3Q9Y6H6 103 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 NINQ8N4C6 2090 aa7.89□□□□□ -1.15
CLSTN3-212ENST00000541770 HRNRQ86YZ3 2850 aaPredicted RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms