RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 KLHL28Q9NXS3 571 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 NXT1Q9UKK6 140 aaKnown RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 ZNF443Q9Y2A4 671 aaPredicted RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 GPR55Q9Y2T6 319 aaPredicted RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 CLDN24A6NM45 220 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 IDH3BO43837 385 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 HS6ST1O60243 411 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 PRKNO60260 465 aaPredicted RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 FADS2O95864 444 aaKnown RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 HPRP00739 348 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 DBIP07108 87 aaKnown RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 JMJD7P0C870 316 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 THRBP10828 461 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 DBTP11182 482 aaKnown RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 BMP4P12644 408 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 IFI30P13284 250 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ETV5P41161 510 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ADARB1P78563 741 aaKnown RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 FLYWCH1Q4VC44 716 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 FAM199XQ6PEV8 388 aaPredicted RBP8.03□□□□□ -1.12
THBS3-210ENST00000541576 DHRS13Q6UX07 377 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ANKRD37Q7Z713 158 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ZAR1Q86SH2 424 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ZNF605Q86T29 641 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ANKRD13BQ86YJ7 626 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 ALDH16A1Q8IZ83 802 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 MORN4Q8NDC4 146 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 OR1N1Q8NGS0 311 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 RHNO1Q9BSD3 238 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 NUDT9Q9BW91 350 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 PRR14Q9BWN1 585 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 WDR54Q9H977 334 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 AMBNQ9NP70 447 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 RLIMQ9NVW2 624 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 PISDQ9UG56 409 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 KCNE5Q9UJ90 142 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 CBLCQ9ULV8 474 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 PMF1-BGLAPU3KQ54 211 aa8.03□□□□□ -1.12
THBS3-210ENST00000541576 NPIPA5A0A0B4J1W7 369 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 IGHV3-20A0A0C4DH32 117 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 C9J4A7 227 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 NPIPA7E9PJI5 369 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 PEX12O00623 359 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 CCNKO75909 580 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 THBS1P07996 1170 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 NPIPA8P0DM63 369 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 PIGAP37287 484 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 MAPK14Q16539 360 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 ZNF836Q6ZNA1 936 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 GALNT6Q8NCL4 622 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 OR6T1Q8NGN1 323 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 DEPDC7Q96QD5 511 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 MBOAT4Q96T53 435 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 ZPBPQ9BS86 351 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 G6PC3Q9BUM1 346 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 GABARAPL1Q9H0R8 117 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.02□□□□□ -1.13
THBS3-210ENST00000541576 LOC100506127A0A0U1RQW1 187 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 PCDH17O14917 1159 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 FRS3O43559 492 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 IGKV1D-16P01601 117 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 GUSBP08236 651 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 RPS4Y1P22090 263 aaKnown RBP8.02□□□□□ -1.13
THBS3-210ENST00000541576 PPICP45877 212 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 HMGA2P52926 109 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 EXOC3L2Q2M3D2 409 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 EIPR1Q53HC9 387 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 BCORP1Q8N888 145 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 OR13F1Q8NGS4 319 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 PHF10Q8WUB8 498 aaKnown RBP8.02□□□□□ -1.13
THBS3-210ENST00000541576 RAB2BQ8WUD1 216 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 TAAR9Q96RI9 348 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 GAL3ST4Q96RP7 486 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 ARHGDIGQ99819 225 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 MESP1Q9BRJ9 268 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 NEK6Q9HC98 313 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 KCND3Q9UK17 655 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 FAM186AA6NE01 2351 aa8.02□□□□□ -1.13
THBS3-210ENST00000541576 TEX51A0A1B0GUA7 166 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 C2orf92A0A1B0GVN3 265 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 TPST2O60704 377 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 UGT2B17O75795 530 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 STK17BO94768 372 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 GADD45GO95257 159 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 CYC1P08574 325 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 NID1P14543 1247 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 SPNP16150 400 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 LIMS1P48059 325 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 RNF144AP50876 292 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 RGS8P57771 180 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 DCAF7P61962 342 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 EIF3IQ13347 325 aaKnown RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 PIN1Q13526 163 aaPredicted RBP8.01□□□□□ -1.13
THBS3-210ENST00000541576 NPTX1Q15818 432 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 HES3Q5TGS1 186 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 HLA-DQA1Q5Y7H0 255 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 KDM4DQ6B0I6 523 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 FAM198BQ6UWH4 519 aa8.01□□□□□ -1.13
THBS3-210ENST00000541576 GLRX5Q86SX6 157 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms