RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 BRIX1Q8TDN6 353 aaKnown RBP9.4□□□□□ -0.9
LMO3-224ENST00000540848 RLN3Q8WXF3 142 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 RIT1Q92963 219 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 DGAT2Q96PD7 388 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 CCNL2Q96S94 520 aaPredicted RBP9.4□□□□□ -0.9
LMO3-224ENST00000540848 MAP3K3Q99759 626 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 TAPBPLQ9BX59 468 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 TRIM2Q9C040 744 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 SLIRPQ9GZT3 109 aaKnown RBP9.4□□□□□ -0.9
LMO3-224ENST00000540848 NXF2Q9GZY0 626 aaKnown RBP9.4□□□□□ -0.9
LMO3-224ENST00000540848 FN3KQ9H479 309 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 TMEM27Q9HBJ8 222 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 PRTFDC1Q9NRG1 225 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.4□□□□□ -0.9
LMO3-224ENST00000540848 PRODH2Q9UF12 536 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 CSNK1G3Q9Y6M4 447 aa9.4□□□□□ -0.9
LMO3-224ENST00000540848 SAGE2PA6NJ88 616 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 M0R129 80 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 TAF4O00268 1085 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FRS3O43559 492 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FOXS1O43638 330 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 DNAJB6O75190 326 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 KCNK2O95069 426 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 RCBTB2O95199 551 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 S1PR1P21453 382 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 DRD5P21918 477 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 NR4A1P22736 598 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 PSMA1P25786 263 aaKnown RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 CD40LGP29965 261 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 GPR3P46089 330 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 GABRA4P48169 554 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 PRKCDQ05655 676 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FOXD4Q12950 439 aaPredicted RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 PGGHGQ32M88 737 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FLYWCH1Q4VC44 716 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 ACSM5Q6NUN0 579 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 Q6ZNX1 250 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 ZNF550Q7Z398 422 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 WDR53Q7Z5U6 358 aaPredicted RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 ZNF761Q86XN6 746 aaPredicted RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 GID4Q8IVV7 300 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 NRMQ8IXM6 262 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 ZNF440Q8IYI8 595 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 SLC34A3Q8N130 599 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 SLC15A4Q8N697 577 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 TMCO5AQ8N6Q1 288 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 POGLUT1Q8NBL1 392 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 OR7G1Q8NGA0 311 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 OR52L1Q8NGH7 329 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 MCFD2Q8NI22 146 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 CHPT1Q8WUD6 406 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 DNASE2BQ8WZ79 361 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FAM46AQ96IP4 442 aaKnown RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 VSTM2LQ96N03 204 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 GPA33Q99795 319 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 JAM3Q9BX67 310 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 ERVMER34-1Q9H9K5 563 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 Q9N2J8 555 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 TMEM74BQ9NUR3 256 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 SLC7A7Q9UM01 511 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 BAIAP2Q9UQB8 552 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 MMACHCQ9Y4U1 282 aa9.39□□□□□ -0.91
LMO3-224ENST00000540848 TDRD6O60522 2096 aaKnown RBP9.39□□□□□ -0.91
LMO3-224ENST00000540848 A0A0A6YYC8 382 aaPredicted RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 PNMA8CA0A1B0GUJ8 204 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 A0A1B0GVG6 124 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 SCO2A0A1W2PP80 73 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 UNC119BA6NIH7 251 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 RHPN2P1A8MT19 583 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 I3L1I5 382 aaPredicted RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 KPNA4O00629 521 aaPredicted RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 SURF4O15260 269 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 CHP2O43745 196 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 IGFBP1P08833 259 aaPredicted RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 CT62P0C5K7 136 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 MSL3P1P0C860 447 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 HSMCR30P0CW71 290 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 S100A5P33763 92 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 GRK5P34947 590 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 MTNR1AP48039 350 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 CTBP2P56545 445 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 LSM3P62310 102 aaKnown RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 FUT7Q11130 342 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 EXOSC7Q15024 291 aaKnown RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 OR1Q1Q15612 314 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 ZNF141Q15928 474 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 TSTQ16762 297 aaKnown RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 RGS21Q2M5E4 152 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 DEFB110Q30KQ9 67 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 WDR45BQ5MNZ6 344 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 YOD1Q5VVQ6 348 aaPredicted RBP9.38□□□□□ -0.91
LMO3-224ENST00000540848 NXNL2Q5VZ03 156 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 TMPRSS11FQ6ZWK6 438 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 ATCAYQ86WG3 371 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 KMT5CQ86Y97 462 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 NKAIN4Q8IVV8 208 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 SFTPA2Q8IWL1 248 aa9.38□□□□□ -0.91
LMO3-224ENST00000540848 TMEFF1Q8IYR6 380 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms