RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TDRPQ86YL5 185 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 OR4C3Q8NH37 302 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 OR2W6PQ8NHA6 318 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ABHD3Q8WU67 409 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 HSD17B8Q92506 261 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 OSTF1Q92882 214 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZBTB8AQ96BR9 441 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 MRRFQ96E11 262 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 GIMAP5Q96F15 307 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ZNF764Q96H86 408 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 RNF145Q96MT1 663 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TMEM237Q96Q45 408 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 BBS4Q96RK4 519 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TACO1Q9BSH4 297 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 EBPLQ9BY08 206 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 SRXN1Q9BYN0 137 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 POTEKPQ9BYX7 375 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 TBL1XR1Q9BZK7 514 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 RABEP2Q9H5N1 569 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 ESRP2Q9H6T0 727 aaKnown RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 C12orf49Q9H741 205 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 COQ10BQ9H8M1 238 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 BARX1Q9HBU1 254 aaPredicted RBP6.48□□□□□ -1.37
YBX3-209ENST00000540747 MYNNQ9NPC7 610 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 FBXO34Q9NWN3 711 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 NINJ2Q9NZG7 142 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 NPAP1Q9NZP6 1156 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 KLHL13Q9P2N7 655 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 GRID1Q9ULK0 1009 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 B3GALT5Q9Y2C3 310 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 SNX8Q9Y5X2 465 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 MALRD1Q5VYJ5 2156 aa6.48□□□□□ -1.37
YBX3-209ENST00000540747 A0A1W2PP18 115 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 A0A1W2PQD3 144 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 NPIPB8E9PQR5 432 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ETV2O00321 342 aaPredicted RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 RGS16O15492 202 aaPredicted RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 DLX3O60479 287 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 RAMP1O60894 148 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ULK1O75385 1050 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 SYNGR4O95473 234 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 NTN1O95631 604 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 OPN1LWP04000 364 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ENO1P06733 434 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 ANXA4P09525 319 aaPredicted RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 COX5AP20674 150 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 EDNRAP25101 427 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ELK4P28324 431 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 GABRA3P34903 492 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 CLK3P49761 638 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 PSMD4P55036 377 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 IRX1P78414 480 aaPredicted RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 SLC18A2Q05940 514 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 FAPQ12884 760 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 SLC29A2Q14542 456 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 RNPS1Q15287 305 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 CD226Q15762 336 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 NRF1Q16656 503 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 HBMQ6B0K9 141 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 GPRIN3Q6ZVF9 776 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 TUSC5Q8IXB3 177 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ZNF619Q8N2I2 560 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 DCAKDQ8WVC6 231 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ROBO4Q8WZ75 1007 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 PIK3R3Q92569 461 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 SLC9A6Q92581 669 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 GTPBP3Q969Y2 492 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 ZNF524Q96C55 264 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 KLHL15Q96M94 604 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 TNFRSF13CQ96RJ3 184 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 CCT8L2Q96SF2 557 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 USB1Q9BQ65 265 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 PRRG4Q9BZD6 226 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 TMEM185BQ9H7F4 350 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 BCO1Q9HAY6 547 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 HHATLQ9HCP6 504 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 NGBQ9NPG2 151 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 DDX18Q9NVP1 670 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 SENP1Q9P0U3 644 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 STOML1Q9UBI4 398 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 ZNF180Q9UJW8 692 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 MRTO4Q9UKD2 239 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 WBP11Q9Y2W2 641 aaKnown RBP6.47□□□□□ -1.37
YBX3-209ENST00000540747 CCL27Q9Y4X3 112 aa6.47□□□□□ -1.37
YBX3-209ENST00000540747 OIP5O43482 229 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 NDUFB5O43674 189 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 GMFGO60234 142 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 TBX19O60806 448 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 KCNK2O95069 426 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 KCNH1O95259 989 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PGM3O95394 542 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 FAM107AO95990 144 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 ADAP00813 363 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 NUDT17P0C025 328 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 PABPC4LP0CB38 370 aaKnown RBP6.46□□□□□ -1.38
YBX3-209ENST00000540747 ACP2P11117 423 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 IL32P24001 234 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 NTSP30990 170 aa6.46□□□□□ -1.38
YBX3-209ENST00000540747 LCN1P31025 176 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms