RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 TP53I3Q53FA7 332 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SP8Q8IXZ3 490 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CFAP52Q8N1V2 620 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 LRRC52Q8N7C0 313 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 C15orf54Q8N8G6 183 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR2D3Q8NGH3 330 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR51A7Q8NH64 312 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 RHEBL1Q8TAI7 183 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SLC16A10Q8TF71 515 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ARNTL2Q8WYA1 636 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 TOMM40LQ969M1 308 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ZNF566Q969W8 418 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CABLES2Q9BTV7 478 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 HMX1Q9NP08 348 aaPredicted RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 GCM1Q9NP62 436 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 RPH3ALQ9UNE2 315 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CEP152O94986 1710 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 C10orf71Q711Q0 1435 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 M0R2N6 131 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 FOLR1P15328 257 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 KLRK1P26718 216 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 AHRP35869 848 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 KRTDAPP60985 99 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SELENOWP63302 87 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 P2RY14Q15391 338 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OR2G6Q5TZ20 316 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ACOT7LQ6ZUV0 252 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 MRPL10Q7Z7H8 261 aaKnown RBP8.27□□□□□ -1.09
YBX3-208ENST00000540447 ZNF559Q9BR84 538 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 UBQLN3Q9H347 655 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 ISYNA1Q9NPH2 558 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 PRDM7Q9NQW5 492 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 UTS2RQ9UKP6 389 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 CAMK2AQ9UQM7 478 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 SHROOM2Q13796 1616 aa8.27□□□□□ -1.09
YBX3-208ENST00000540447 OTOL1A6NHN0 477 aaPredicted RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 H7BYZ3 331 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CFHP08603 1231 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 OAZ1P54368 228 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 PCBP4P57723 403 aaKnown RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 TPPP2P59282 170 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 RAB11AP62491 216 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ZNF33AQ06730 810 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ZNF763Q0D2J5 394 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 MAJINQ3KP22 176 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 POM121L1PQ3SYA9 428 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SIRPB2Q5JXA9 342 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 MLIPQ5VWP3 458 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 LPCAT3Q6P1A2 487 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CHST9Q7L1S5 443 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ABHD13Q7L211 337 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 L3MBTL4Q8NA19 623 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CAMKVQ8NCB2 501 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ADPRHL1Q8NDY3 354 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 OR1J1Q8NGS3 322 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ZNF417Q8TAU3 575 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 UCN3Q969E3 161 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SLC25A46Q96AG3 418 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 BPIFA2Q96DR5 249 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ARV1Q9H2C2 271 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 NRCAMQ92823 1304 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 SYT5O00445 386 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ST8SIA5O15466 376 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 PI15O43692 258 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 NME2P1O60361 137 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CLN5O75503 358 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 AK1P00568 194 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CSF3P09919 207 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CCKBRP32239 447 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 DHPSP49366 369 aaPredicted RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 DAPP51397 102 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 CLDN8P56748 225 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 B2MP61769 119 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ZNF91Q05481 1191 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 LTBQ06643 244 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 OR5I1Q13606 314 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 OR2A2Q6IF42 318 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 WDR74Q6RFH5 385 aaPredicted RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 TMPRSS9Q7Z410 1059 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 OR4F15Q8NGB8 312 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SCLYQ96I15 445 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 BTN2A3PQ96KV6 586 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 DHRS4Q9BTZ2 278 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 POLDIP3Q9BY77 421 aaKnown RBP8.26□□□□□ -1.09
YBX3-208ENST00000540447 SEC61A2Q9H9S3 476 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 ZNF286AQ9HBT8 521 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 A0A1B0GV90 55 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 K7ERQ8 282 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 PDHXO00330 501 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SOCS7O14512 581 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SURF4O15260 269 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 SLC16A6O15403 523 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 IL33O95760 270 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 GBAP04062 536 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 HTR2CP28335 458 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 RFC3P40938 356 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 MTNR1BP49286 362 aa8.26□□□□□ -1.09
YBX3-208ENST00000540447 FAM189BP81408 668 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms