RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 IL2RAP01589 272 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 IL6P05231 212 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 PEPDP12955 493 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 PSMA4P25789 261 aaKnown RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 DLX5P56178 289 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TOMM34Q15785 309 aaPredicted RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HSPB2Q16082 182 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 MAPK14Q16539 360 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 BCL2A1Q16548 175 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TYW3Q6IPR3 259 aaKnown RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 MEX3BQ6ZN04 569 aaKnown RBP13.59□□□□□ -0.23
UBE3B-212ENST00000540230 C16orf62Q7Z3J2 963 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 GGNQ86UU5 652 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 GCNT2Q8N0V5 402 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 MIER2Q8N344 545 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 ZNF527Q8NB42 609 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 RNF145Q96MT1 663 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 HOXD1Q9GZZ0 328 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 ICAM5Q9UMF0 924 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 DTNAQ9Y4J8 743 aa13.59□□□□□ -0.23
UBE3B-212ENST00000540230 TEX15Q9BXT5 2789 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ABCA12Q86UK0 2595 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 APCP25054 2843 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 RFXANKO14593 260 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 KIAA0513O60268 411 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 BCAS1O75363 584 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 STX11O75558 287 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 AK1P00568 194 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 OPN1LWP04000 364 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 LINGO3P0C6S8 592 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 IL11P20809 199 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 KHKP50053 298 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 POLR2JP52435 117 aaKnown RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 MVDP53602 400 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 SNTB1Q13884 538 aaKnown RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 SF3B4Q15427 424 aaKnown RBP eCLIP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF141Q15928 474 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 GLYR1Q49A26 553 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 FRRS1Q6ZNA5 592 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 MTERF4Q7Z6M4 381 aaKnown RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 LSRQ86X29 649 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 FUNDC1Q8IVP5 155 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ZFP90Q8TF47 636 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 FIG4Q92562 907 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ROPN1LQ96C74 230 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ZG16BQ96DA0 208 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 AURKBQ96GD4 344 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF845Q96IR2 970 aaPredicted RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 UCN2Q96RP3 112 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 SPOCK3Q9BQ16 436 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 NMUR2Q9GZQ4 415 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 QRSL1Q9H0R6 528 aaKnown RBP13.58□□□□□ -0.24
UBE3B-212ENST00000540230 EXD2Q9NVH0 621 aa13.58□□□□□ -0.24
UBE3B-212ENST00000540230 TMIGD3P0DMS9 266 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF17P17021 662 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 MRPL19P49406 292 aaKnown RBP13.57□□□□□ -0.24
UBE3B-212ENST00000540230 P2RX1P51575 399 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 PLAURQ03405 335 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 FOXF1Q12946 379 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 SYPL1Q16563 259 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 SLC2A7Q6PXP3 512 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 GRAMD2AQ8IUY3 354 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 GTPBP8Q8N3Z3 284 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-212ENST00000540230 TRIML2Q8N7C3 387 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 ANKFN1Q8N957 763 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 RFWD2Q8NHY2 731 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
UBE3B-212ENST00000540230 CCDC28BQ9BUN5 200 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 TMEM185BQ9H7F4 350 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF629Q9UEG4 869 aaPredicted RBP13.57□□□□□ -0.24
UBE3B-212ENST00000540230 L3MBTL1Q9Y468 752 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 WDR45Q9Y484 360 aa13.57□□□□□ -0.24
UBE3B-212ENST00000540230 A0A087WZY1 265 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 FAM234BA2RU67 622 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 C7orf72A4D263 438 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 SERINC4A6NH21 518 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 CLDN24A6NM45 220 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 DVL2O14641 736 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 EFNA2O43921 213 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 EDF1O60869 148 aaKnown RBP13.56□□□□□ -0.24
UBE3B-212ENST00000540230 RCBTB2O95199 551 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 H6PDO95479 791 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 CHRM4P08173 479 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 UBL4AP11441 157 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 CTSSP25774 331 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 SHC1P29353 583 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 ZNF41P51814 821 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-212ENST00000540230 CHRNEQ04844 493 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 LRRC74AQ0VAA2 488 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 MAPK11Q15759 364 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 CTU2Q2VPK5 515 aaKnown RBP13.56□□□□□ -0.24
UBE3B-212ENST00000540230 GPAT3Q53EU6 434 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 ATAD3BQ5T9A4 648 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 DMRTC2Q8IXT2 367 aaPredicted RBP13.56□□□□□ -0.24
UBE3B-212ENST00000540230 MEIOBQ8N635 442 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 GTF2H4Q92759 462 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 WNT2BQ93097 391 aa13.56□□□□□ -0.24
UBE3B-212ENST00000540230 ZBTB8AQ96BR9 441 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms