RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 DCTN4Q9UJW0 460 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 MKLN1Q9UL63 735 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 ICAM5Q9UMF0 924 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 AP4B1Q9Y6B7 739 aa12.11□□□□□ -0.47
CCDC130-202ENST00000540216 A0A096LPI6 279 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 A0A0G2JND7 137 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 NR5A2O00482 541 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 DVL2O14641 736 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF264O43296 627 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
CCDC130-202ENST00000540216 GMFGO60234 142 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 TNFRSF21O75509 655 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 UGT2B17O75795 530 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 COL8A1P27658 744 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 ADH6P28332 368 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 STARP49675 285 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 SP5Q6BEB4 398 aaPredicted RBP12.1□□□□□ -0.47
CCDC130-202ENST00000540216 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 TYW3Q6IPR3 259 aaKnown RBP12.1□□□□□ -0.47
CCDC130-202ENST00000540216 FRRS1Q6ZNA5 592 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 EIF3MQ7L2H7 374 aaKnown RBP12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CHMP1BQ7LBR1 199 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 FUNDC1Q8IVP5 155 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 RFWD2Q8NHY2 731 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 WNT2BQ93097 391 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 SPDL1Q96EA4 605 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 THOC1Q96FV9 657 aaKnown RBP12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 SLC6A13Q9NSD5 602 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CALML5Q9NZT1 146 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CCDC167Q9P0B6 97 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CLCF1Q9UBD9 225 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 P2RX2Q9UBL9 471 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 VDAC3Q9Y277 283 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 SLC35A3Q9Y2D2 325 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF337Q9Y3M9 751 aa12.1□□□□□ -0.47
CCDC130-202ENST00000540216 FAM90A27PA6NNH2 459 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 CLCA1A8K7I4 914 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 H3BML4 177 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 TOXO94900 526 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 H6PDO95479 791 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 NUDT14O95848 222 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 CSTAP01040 98 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 NR2F1P10589 423 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 NCF2P19878 526 aaPredicted RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 ELK4P28324 431 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 GRNP28799 593 aaKnown RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 MVDP53602 400 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 FADDQ13158 208 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 SKP2Q13309 424 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 GNA13Q14344 377 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 FGFBP1Q14512 234 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 AGKQ53H12 422 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 COX20Q5RI15 118 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 LRIF1Q5T3J3 769 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 CBLN3Q6UW01 205 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 LRRC74BQ6ZQY2 392 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 GRAMD2AQ8IUY3 354 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 CMIPQ8IY22 773 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 TMCO5AQ8N6Q1 288 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 TNIP2Q8NFZ5 429 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 TSPEARQ8WU66 669 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 ARSGQ96EG1 525 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 LAT2Q9GZY6 243 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 PAIP1Q9H074 479 aaKnown RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF629Q9UEG4 869 aaPredicted RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 L3MBTL1Q9Y468 752 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 ZNF175Q9Y473 711 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 PCDHB14Q9Y5E9 798 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 GPC6Q9Y625 555 aaPredicted RBP12.09□□□□□ -0.47
CCDC130-202ENST00000540216 GMEB1Q9Y692 573 aa12.09□□□□□ -0.47
CCDC130-202ENST00000540216 PCNX3Q9H6A9 2034 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 A0A1W2PP18 115 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 TMEM247A6NEH6 219 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 AGAP5A6NIR3 686 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 DNAJA2O60884 412 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 IL18BPO95998 194 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 COX6B1P14854 86 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 HOXB9P17482 250 aaPredicted RBP12.08□□□□□ -0.48
CCDC130-202ENST00000540216 CAPN3P20807 821 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 PPIBP23284 216 aaKnown RBP12.08□□□□□ -0.48
CCDC130-202ENST00000540216 ME2P23368 584 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 CTSSP25774 331 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 PSMA4P25789 261 aaKnown RBP12.08□□□□□ -0.48
CCDC130-202ENST00000540216 OPRM1P35372 400 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 CRATP43155 626 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 DSTNP60981 165 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 RPS3AP61247 264 aaKnown RBP12.08□□□□□ -0.48
CCDC130-202ENST00000540216 RAC1P63000 192 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 EEF1A1P68104 462 aaKnown RBP12.08□□□□□ -0.48
CCDC130-202ENST00000540216 GUCY1A3Q02108 690 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 CBFBQ13951 182 aa12.08□□□□□ -0.48
CCDC130-202ENST00000540216 SYPL1Q16563 259 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms