RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MLC1Q15049 377 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 BCL2A1Q16548 175 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 SAMD12Q8N8I0 201 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 SLC7A6Q92536 515 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 DACT3Q96B18 629 aaPredicted RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 MSLNLQ96KJ4 702 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 SDF2Q99470 211 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 ARHGDIGQ99819 225 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 TCEAL2Q9H3H9 227 aaPredicted RBP12.7□□□□□ -0.38
BNIP3-202ENST00000540159 MPDZO75970 2070 aa12.7□□□□□ -0.38
BNIP3-202ENST00000540159 DMDP11532 3685 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 AKR7A2O43488 359 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 AKAP8O43823 692 aaKnown RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 PRICKLE3O43900 615 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 CELA2BP08218 269 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 LAMP2P13473 410 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 BMP7P18075 431 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 NAA10P41227 235 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 MAP2K3P46734 347 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 OR12D2P58182 307 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 RGS1Q08116 209 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 C1orf61Q13536 156 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 OTPQ5XKR4 325 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 LYPD4Q6UWN0 246 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 VASH1Q7L8A9 365 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 VWA5B2Q8N398 1253 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 DNAJC5GQ8N7S2 189 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 YIPF7Q8N8F6 280 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 OSTF1Q92882 214 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 OR2M4Q96R27 311 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 EXOSC1Q9Y3B2 195 aaKnown RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 ALG5Q9Y673 324 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 CABIN1Q9Y6J0 2220 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 SGK494L7N484 410 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 PPP1R3DO95685 299 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 SYPP08247 313 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 ERVK-21P61565 698 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 OR1Q1Q15612 314 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF776Q68DI1 518 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF322Q6U7Q0 402 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 TMEM64Q6YI46 380 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 IZUMO1Q8IYV9 350 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 MFSD9Q8NBP5 474 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 GCDHQ92947 438 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 EFHD2Q96C19 240 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 C10orf90Q96M02 699 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 GPR174Q9BXC1 333 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 ASXL3Q9C0F0 2248 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 NT5DC2Q9H857 520 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 IL21RQ9HBE5 538 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 FGF20Q9NP95 211 aaPredicted RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 SIDT1Q9NXL6 827 aaKnown RBP12.69□□□□□ -0.38
BNIP3-202ENST00000540159 IL20Q9NYY1 176 aa12.69□□□□□ -0.38
BNIP3-202ENST00000540159 KDM4EB2RXH2 506 aaPredicted RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ADAM11O75078 769 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 HLA-DPB1P04440 258 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 HOXB2P14652 356 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF136P52737 540 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 TRA2BP62995 288 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 FZD5Q13467 585 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 GPR18Q14330 331 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF628Q5EBL2 1059 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CD300LDQ6UXZ3 194 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 DGAT2L6Q6ZPD8 337 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 MBOAT2Q6ZWT7 520 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ASCC1Q8N9N2 400 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 RFKQ969G6 155 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CLIP3Q96DZ5 547 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 MCUBQ9NWR8 336 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF346Q9UL40 294 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SLC17A4Q9Y2C5 497 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 HEATR5AQ86XA9 2040 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 K7EQS6 105 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 HRKO00198 91 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 PYCR1P32322 319 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CRMP1Q14194 572 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 EOGTQ5NDL2 527 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZNF425Q6IV72 752 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 SSX6Q7RTT6 188 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 NANOGNBQ7Z5D8 188 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 GATSQ8NAP1 163 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 FAM3CQ92520 227 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 AP3S1Q92572 193 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZMYND19Q96E35 227 aaPredicted RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 C4orf36Q96KX1 117 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 ZFP3Q96NJ6 502 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 MS4A4EQ96PG1 132 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 CD180Q99467 661 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 C1QTNF2Q9BXJ5 285 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 WDFY4Q6ZS81 3184 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 C4orf47A7E2U8 309 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 GTPBP1O00178 669 aaKnown RBP12.68□□□□□ -0.38
BNIP3-202ENST00000540159 LYRM1O43325 122 aa12.68□□□□□ -0.38
BNIP3-202ENST00000540159 KLF8O95600 359 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms