RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ARHGAP19Q14CB8 494 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 OXA1LQ15070 435 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 INAVAQ3KP66 663 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM179BQ7Z7N9 219 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 MSRB3Q8IXL7 192 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 SPAG16Q8N0X2 631 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 HORMAD2Q8N7B1 307 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 THAP6Q8TBB0 222 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 CHTF18Q8WVB6 975 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 DGAT2Q96PD7 388 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 OR2M4Q96R27 311 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 ALG8Q9BVK2 526 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 PRR14Q9BWN1 585 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 EGLN3Q9H6Z9 239 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 C8orf33Q9H7E9 229 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GSKIPQ9P0R6 139 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 HEBP2Q9Y5Z4 205 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 FOXE1O00358 373 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 PLRG1O43660 514 aaKnown RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 CSTAP01040 98 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 JUNBP17275 347 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 COL9A1P20849 921 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 PPP2CBP62714 309 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 PPP2CAP67775 309 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GRK1Q15835 563 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TP53I3Q53FA7 332 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 NUP54Q7Z3B4 507 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GPALPP1Q8IXQ4 340 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TP53I13Q8NBR0 393 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TREX2Q9BQ50 279 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 METTL8Q9H825 291 aaKnown RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 SCML1Q9UN30 329 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM5Q9Y2B1 443 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 NUP210Q8TEM1 1887 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 ZFC3H1O60293 1989 aaKnown RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 MRPS14O60783 128 aaKnown RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 RAB28P51157 221 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 VSX2P58304 361 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 POU4F3Q15319 338 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GPR19Q15760 415 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 ZNF542PQ5EBM4 170 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 PRRT3Q5FWE3 981 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GARNL3Q5VVW2 1013 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 FAM205BPQ63HN1 556 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 ADAMTS16Q8TE57 1224 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 SLC35B4Q969S0 331 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TSACCQ96A04 125 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 C7orf34Q96L11 122 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 TIMM29Q9BSF4 260 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 THAP7Q9BT49 309 aaPredicted RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 POLDIP3Q9BY77 421 aaKnown RBP9.35□□□□□ -0.91
TRAF1-202ENST00000540010 C14orf105Q9NVL8 296 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 GRHPRQ9UBQ7 328 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 RASD1Q9Y272 281 aa9.35□□□□□ -0.91
TRAF1-202ENST00000540010 C2orf16Q68DN1 1984 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ALPK2Q86TB3 2170 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 TCRBV5S2A0A599 114 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 HMX3A6NHT5 357 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM150CB9EJG8 249 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ARPC5O15511 151 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 RAD1O60671 282 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 C6orf132Q5T0Z8 1188 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CCNJQ5T5M9 372 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 STX12Q86Y82 276 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 GALNT6Q8NCL4 622 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 OR8J2Q8NGG1 315 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 OR9A2Q8NGT5 310 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 NDUFAF4Q9P032 175 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 C5orf42Q9H799 3197 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 POM121BA6NF01 834 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SCDO00767 359 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 RGS9O75916 674 aaPredicted RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 DDCP20711 480 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 GIFP27352 417 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 NDUFS1P28331 727 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 EVI2BP34910 448 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 TRIM23P36406 574 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 LRIF1Q5T3J3 769 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 RASGRP3Q8IV61 690 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 RIMKLAQ8IXN7 391 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 LAS2Q8IYD9 372 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 OR5H6Q8NGV6 325 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SLC38A5Q8WUX1 472 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 FKBP10Q96AY3 582 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 HAVCR1Q96D42 359 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SLC41A3Q96GZ6 507 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 TMEM185BQ9H7F4 350 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SYNPO2LQ9H987 977 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 FGF22Q9HCT0 170 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CNOT2Q9NZN8 540 aaKnown RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 PLXNB3Q9ULL4 1909 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SERTM1A2A2V5 107 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ANKRD33BA6NCL7 494 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 METTL15A6NJ78 407 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 F5H0A9 414 aaPredicted RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 SOX1O00570 391 aaPredicted RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 PRKYO43930 277 aa9.34□□□□□ -0.91
TRAF1-202ENST00000540010 CREBL2O60519 120 aaPredicted RBP9.34□□□□□ -0.91
TRAF1-202ENST00000540010 ADAM23O75077 832 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms