RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 MRPL14Q6P1L8 145 aaKnown RBP15.59■□□□□ 0.09
COPS3-212ENST00000539941 TTC33Q6PID6 262 aaPredicted RBP15.59■□□□□ 0.09
COPS3-212ENST00000539941 ANKRD37Q7Z713 158 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ZAR1Q86SH2 424 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 CMIPQ8IY22 773 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ZSCAN1Q8NBB4 408 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 AQP11Q8NBQ7 271 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 C17orf47Q8NEP4 570 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 OR9Q2Q8NGE9 314 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ADIPOR1Q96A54 375 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 MCHR1Q99705 422 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 NUDT9Q9BW91 350 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 HOXD1Q9GZZ0 328 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 HMG20AQ9NP66 347 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.59■□□□□ 0.09
COPS3-212ENST00000539941 MAN2C1Q9NTJ4 1040 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 SLC39A1Q9NY26 324 aa15.59■□□□□ 0.09
COPS3-212ENST00000539941 TPST2O60704 377 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 RFPL3O75679 317 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 CLPXO76031 633 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 ATE1O95260 518 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 BCL10O95999 233 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 EMP2P54851 167 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 FOXK2Q01167 660 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 KCNJ8Q15842 424 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 HLA-DQA1Q5Y7H0 255 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 LANCL3Q6ZV70 420 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 PLEKHM3Q6ZWE6 761 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 SLC29A4Q7RTT9 530 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 ZNF321PQ8N8H1 164 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 SLC7A13Q8TCU3 470 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 SLC38A4Q969I6 547 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 SPSB2Q99619 263 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 PITX2Q99697 317 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 DGCR6LQ9BY27 220 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 ING2Q9H160 280 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 TESQ9UGI8 421 aaKnown RBP15.58■□□□□ 0.08
COPS3-212ENST00000539941 DAPK2Q9UIK4 370 aa15.58■□□□□ 0.08
COPS3-212ENST00000539941 NDRG4Q9ULP0 352 aaKnown RBP15.58■□□□□ 0.08
COPS3-212ENST00000539941 PPIEQ9UNP9 301 aaKnown RBP15.58■□□□□ 0.08
COPS3-212ENST00000539941 NPIPA5A0A0B4J1W7 369 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 C2orf92A0A1B0GVN3 265 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 CLDN24A6NM45 220 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NPIPA7E9PJI5 369 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 TO15178 435 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 FRS3O43559 492 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NDUFB5O43674 189 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 CYP7B1O75881 506 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 IL33O95760 270 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NPIPA8P0DM63 369 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 SDHBP21912 280 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 RFX3P48380 749 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 ZNF136P52737 540 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 FGFBP1Q14512 234 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 EBPQ15125 230 aaKnown RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 SEC23BQ15437 767 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 ENTPD8Q5MY95 495 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 PDZK1Q5T2W1 519 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 TSPYL5Q86VY4 417 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 ZNF786Q8N393 782 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 RAB2BQ8WUD1 216 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 APOL4Q9BPW4 351 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 ZPBPQ9BS86 351 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 C19orf25Q9UFG5 118 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 PCDHGA1Q9Y5H4 931 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 GMPPBQ9Y5P6 360 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 SAGE2PA6NJ88 616 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 OR10H3O60404 316 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 POLR2IP36954 125 aaKnown RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 CLK3P49761 638 aaKnown RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 GPR143P51810 404 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 UGT2B15P54855 530 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NFATC3Q12968 1075 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 PODNL1Q6PEZ8 512 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 TMEM205Q6UW68 189 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 SHISA6Q6ZSJ9 500 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 C9orf40Q8IXQ3 194 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 LIN37Q96GY3 246 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 HRASLS5Q96KN8 279 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NIPSNAP1Q9BPW8 284 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 CRB3Q9BUF7 120 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 SEMA4CQ9C0C4 833 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 WWTR1Q9GZV5 400 aa15.57■□□□□ 0.08
COPS3-212ENST00000539941 NXF5Q9H1B4 397 aaKnown RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 GPN2Q9H9Y4 310 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 GPN3Q9UHW5 284 aaPredicted RBP15.57■□□□□ 0.08
COPS3-212ENST00000539941 CPSF4LA6NMK7 179 aaKnown RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 C9J4A7 227 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 CLDN25C9JDP6 229 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 FOXD2O60548 495 aaPredicted RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 SEC24DO94855 1032 aaPredicted RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 GASTP01350 101 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 CYP4B1P13584 511 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ZNF28P17035 718 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 JUNBP17275 347 aaPredicted RBP15.56■□□□□ 0.08
COPS3-212ENST00000539941 IFNGR2P38484 337 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ISL1P61371 349 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 ITGADQ13349 1161 aa15.56■□□□□ 0.08
COPS3-212ENST00000539941 NNATQ16517 81 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms