RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 OR1N1Q8NGS0 311 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 MCFD2Q8NI22 146 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 WDR36Q8NI36 951 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 SLC39A7Q92504 469 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 DNASE1L2Q92874 299 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 SLAMF9Q96A28 289 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 EID2BQ96D98 161 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PEX11GQ96HA9 241 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 GPR21Q99679 349 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ADI1Q9BV57 179 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 BCO1Q9HAY6 547 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 HEPACAM2A8MVW5 462 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 TM4SF5O14894 197 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 GPR39O43194 453 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 SSX4O60224 188 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 KCNK5O95279 499 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PRAMEF1O95521 474 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 CSF2P04141 144 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 GTF2E2P29084 291 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 CLDN8P56748 225 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 RAP1AP62834 184 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 TUBB3Q13509 450 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 PAQR3Q6TCH7 311 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 FAM151BQ6UXP7 276 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 Q6ZVU0 165 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 DEFB107AQ8IZN7 70 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ABCA7Q8IZY2 2146 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PARP16Q8N5Y8 322 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 L3MBTL4Q8NA19 623 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 C16orf78Q8WTQ4 265 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZNF479Q96JC4 524 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 GAL3ST4Q96RP7 486 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PRRG3Q9BZD7 231 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZNF436Q9C0F3 470 aaPredicted RBP11.78□□□□□ -0.52
DDX55-206ENST00000539934 MFFQ9GZY8 342 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 PRDM13Q9H4Q3 707 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZDHHC2Q9UIJ5 367 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 TBC1D24Q9ULP9 559 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 POFUT2Q9Y2G5 429 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 ZNF451Q9Y4E5 1061 aa11.78□□□□□ -0.52
DDX55-206ENST00000539934 HCN1O60741 890 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 PRAMEF2O60811 474 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 ELK4P28324 431 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 CD96P40200 585 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 NNMTP40261 264 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 ALDH3B1P43353 468 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 SRP9P49458 86 aaKnown RBP11.77□□□□□ -0.53
DDX55-206ENST00000539934 IL24Q13007 206 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 UBAP2LQ14157 1087 aaKnown RBP11.77□□□□□ -0.53
DDX55-206ENST00000539934 RGS7BPQ6MZT1 257 aaPredicted RBP11.77□□□□□ -0.53
DDX55-206ENST00000539934 FBXO42Q6P3S6 717 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 EPGNQ6UW88 154 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 UNQ6494/PRO21346Q6UXR6 183 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 CYHR1Q6ZMK1 362 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.77□□□□□ -0.53
DDX55-206ENST00000539934 ADIPOR2Q86V24 386 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 OR13C2Q8NGS9 318 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 SMARCD2Q92925 531 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 RBP7Q96R05 134 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 MCCC1Q96RQ3 725 aaPredicted RBP11.77□□□□□ -0.53
DDX55-206ENST00000539934 KCMF1Q9P0J7 381 aa11.77□□□□□ -0.53
DDX55-206ENST00000539934 AQP12BA6NM10 295 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 LRP3O75074 770 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 VAMP5O95183 116 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 LALBAP00709 142 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 LIPFP07098 398 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 IL11P20809 199 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 MYL9P24844 172 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 LIPAP38571 399 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 CAMLGP49069 296 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 CCR6P51684 374 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 MERTKQ12866 999 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 EPS8Q12929 822 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 SLAQ13239 276 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 FASTKQ14296 549 aaKnown RBP11.76□□□□□ -0.53
DDX55-206ENST00000539934 ZNF404Q494X3 552 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 BAIAP2L2Q6UXY1 529 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 SLC22A15Q8IZD6 547 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 STPG2Q8N412 459 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 MFSD9Q8NBP5 474 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 RRNAD1Q96FB5 475 aaKnown RBP11.76□□□□□ -0.53
DDX55-206ENST00000539934 LRRC46Q96FV0 321 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 NUDT11Q96G61 164 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
DDX55-206ENST00000539934 LRRC3BQ96PB8 259 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 OR2A14Q96R47 310 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 NXF2Q9GZY0 626 aaKnown RBP11.76□□□□□ -0.53
DDX55-206ENST00000539934 ING2Q9H160 280 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 EML4Q9HC35 981 aaKnown RBP11.76□□□□□ -0.53
DDX55-206ENST00000539934 ZDHHC8Q9ULC8 765 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 TBC1D3KA0A087X1G2 549 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 GLYATL1P3A0A0U1RQE8 302 aa11.76□□□□□ -0.53
DDX55-206ENST00000539934 NPIPB15A6NHN6 443 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms