RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 C2orf92A0A1B0GVN3 265 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 FRG2CA6NGY1 282 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 FPR3P25089 353 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 STAT5AP42229 794 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 GP2P55259 537 aaKnown RBP20.68■□□□□ 0.9
HOMER3-204ENST00000539827 SNRPGP62308 76 aaKnown RBP20.68■□□□□ 0.9
HOMER3-204ENST00000539827 BCDIN3DQ7Z5W3 292 aaKnown RBP20.68■□□□□ 0.9
HOMER3-204ENST00000539827 SVOPQ8N4V2 548 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 GATSQ8NAP1 163 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 C7orf57Q8NEG2 295 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 TEX47Q8TBZ9 253 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 TMEM239Q8WW34 195 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 MYDGFQ969H8 173 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 C12orf43Q96C57 262 aaKnown RBP20.68■□□□□ 0.9
HOMER3-204ENST00000539827 ART5Q96L15 291 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 SIGLEC11Q96RL6 698 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 MESP1Q9BRJ9 268 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 DNAJC27Q9NZQ0 273 aa20.68■□□□□ 0.9
HOMER3-204ENST00000539827 ASCC3Q8N3C0 2202 aaKnown RBP20.68■□□□□ 0.9
HOMER3-204ENST00000539827 IGLV3-12A0A075B6K2 115 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 A0A1B0GWA3 101 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 CDC14CA4D256 554 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 KPNA4O00629 521 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 KHNYNO15037 678 aaKnown RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 KLF4O43474 513 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 MRPS14O60783 128 aaKnown RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 LDOC1O95751 146 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 IL33O95760 270 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 CSTAP01040 98 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 HEXBP07686 556 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 STSP08842 583 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 DCKP27707 260 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 PCSK6P29122 969 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 C21orf33P30042 268 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 CSTF2P33240 577 aaKnown RBP eCLIP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 EBPQ15125 230 aaKnown RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 LCN10Q6JVE6 187 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 ZNF613Q6PF04 617 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 POGLUT1Q8NBL1 392 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 B3GNT7Q8NFL0 401 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 RORBQ92753 470 aa20.67■□□□□ 0.9
HOMER3-204ENST00000539827 ZNF223Q9UK11 482 aaPredicted RBP20.67■□□□□ 0.9
HOMER3-204ENST00000539827 PRKYO43930 277 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 CDK1P06493 297 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 TUBA3CQ13748 450 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 HLA-DQA1Q5Y7H0 255 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 DESI1Q6ICB0 168 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 ZNF550Q7Z398 422 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 CADM2Q8N3J6 435 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 OR1N1Q8NGS0 311 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 MPP4Q96JB8 637 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 SLC25A19Q9HC21 320 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 ACOT13Q9NPJ3 140 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 COPS7AQ9UBW8 275 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 WARS2Q9UGM6 360 aaKnown RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 A0A0B4J2E0 115 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 A0A1B0GX12 115 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 SH3D21A4FU49 640 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 CDC42EP2O14613 210 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 IFI30P13284 250 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 NR0B1P51843 470 aaKnown RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 SMSP52788 366 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 CLPPQ16740 277 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 KLHL26Q53HC5 615 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 CLEC12AQ5QGZ9 265 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 ZNF385CQ66K41 422 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 STX19Q8N4C7 294 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 TSSK6Q9BXA6 273 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 DPH1Q9BZG8 443 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 TRIM2Q9C040 744 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 KRCC1Q9NPI7 259 aaPredicted RBP20.66■□□□□ 0.9
HOMER3-204ENST00000539827 ATP13A2Q9NQ11 1180 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 C20orf141Q9NUB4 165 aa20.66■□□□□ 0.9
HOMER3-204ENST00000539827 COL5A1P20908 1838 aaPredicted RBP20.65■□□□□ 0.9
HOMER3-204ENST00000539827 IDSB3KWA1 339 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 TLX2O43763 284 aaPredicted RBP20.65■□□□□ 0.9
HOMER3-204ENST00000539827 UTS2O95399 124 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 FUT1P19526 365 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 MAKP20794 623 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 PCYT1AP49585 367 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 OVCH1Q7RTY7 1134 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 ANKRD37Q7Z713 158 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 CMIPQ8IY22 773 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 OR8J1Q8NGP2 316 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 TRUB1Q8WWH5 349 aaKnown RBP20.65■□□□□ 0.9
HOMER3-204ENST00000539827 TBC1D23Q9NUY8 699 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 NCOR1O75376 2440 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 SYNDIG1LA6NDD5 238 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 REM1O75628 298 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 HBQ1P09105 142 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 GRK6P43250 576 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 ST3GAL4Q11206 333 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 SNAPC1Q16533 368 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 ZSWIM7Q19AV6 140 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 SLC27A4Q6P1M0 643 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 SLC29A4Q7RTT9 530 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 RNF113BQ8IZP6 322 aaKnown RBP20.65■□□□□ 0.9
HOMER3-204ENST00000539827 RHBDD1Q8TEB9 315 aa20.65■□□□□ 0.9
HOMER3-204ENST00000539827 ADOQ96SZ5 270 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms