RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 MATN1P21941 496 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 S100A3P33764 101 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 P2RX1P51575 399 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 TPD52P55327 224 aaPredicted RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 RPS26P62854 115 aaKnown RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 ZNF117Q03924 483 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 PON3Q15166 354 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 GUSBP1Q15486 140 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 FAM174BQ3ZCQ3 159 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 SPANXN4Q5MJ08 99 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.4□□□□□ -0.74
RTN3-209ENST00000538995 ATAD3BQ5T9A4 648 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 AGBL2Q5U5Z8 902 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 SAXO2Q658L1 398 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 HEPHL1Q6MZM0 1159 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ESPNLQ6ZVH7 1005 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 GLB1L3Q8NCI6 653 aaPredicted RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 TOR1AIP2Q8NFQ8 470 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 OR5D16Q8NGK9 328 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 FNDC9Q8TBE3 224 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 PHOSPHO1Q8TCT1 267 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 SMPDL3BQ92485 455 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 FIG4Q92562 907 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ZBTB9Q96C00 473 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 NEURL3Q96EH8 262 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 MAELQ96JY0 434 aaKnown RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 ADGRG7Q96K78 797 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 RNF145Q96MT1 663 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 CCDC115Q96NT0 180 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 SDF2Q99470 211 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ZNF350Q9GZX5 532 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 SERHL2Q9H4I8 314 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 MANSC1Q9H8J5 431 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 POLE3Q9NRF9 147 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 RASSF1Q9NS23 344 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 GALNT8Q9NY28 637 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 BTNL2Q9UIR0 455 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 ICAM5Q9UMF0 924 aa10.4□□□□□ -0.74
RTN3-209ENST00000538995 GPC6Q9Y625 555 aaPredicted RBP10.4□□□□□ -0.74
RTN3-209ENST00000538995 SHISA8B8ZZ34 492 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ETV2O00321 342 aaPredicted RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 EIF1AYO14602 144 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 KIAA0513O60268 411 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 EIF4E2O60573 245 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 STX11O75558 287 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 CD8BP10966 210 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 UBL4AP11441 157 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 EPXP11678 715 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 IDO1P14902 403 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 EPHA3P29320 983 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 KHKP50053 298 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 PHC1P78364 1004 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ZNF141Q15928 474 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 SGCBQ16585 318 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 CTU2Q2VPK5 515 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 ARHGAP11BQ3KRB8 267 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 PDSS1Q5T2R2 415 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 AP1ARQ63HQ0 302 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 PLXDC2Q6UX71 529 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 C16orf62Q7Z3J2 963 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 LUZP2Q86TE4 346 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ANKRD46Q86W74 232 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 TRIML2Q8N7C3 387 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 CNEP1R1Q8N9A8 125 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 OR10D3Q8NH80 312 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 OR2V1Q8NHB1 315 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 POC1BQ8TC44 478 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 STARD4Q96DR4 205 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ARSGQ96EG1 525 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ZNF845Q96IR2 970 aaPredicted RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 MRGPRX4Q96LA9 322 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 DACH2Q96NX9 599 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 ZBTB18Q99592 522 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 GPATCH1Q9BRR8 931 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 DNAJB12Q9NXW2 375 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 MCTS1Q9ULC4 181 aaKnown RBP10.39□□□□□ -0.75
RTN3-209ENST00000538995 GPR45Q9Y5Y3 372 aa10.39□□□□□ -0.75
RTN3-209ENST00000538995 NPIPA5A0A0B4J1W7 369 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 SERINC4A6NH21 518 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 GJE1A6NN92 205 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 NPIPA7E9PJI5 369 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 GTPBP1O00178 669 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 ZNF264O43296 627 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 NUDT14O95848 222 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 PGRP06401 933 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 NPIPA8P0DM63 369 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 CHI3L1P36222 383 aaPredicted RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 MAGEA8P43361 318 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 KIR2DL2P43627 348 aaPredicted RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 EIF1AXP47813 144 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 ANXA11P50995 505 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 UFM1P61960 85 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 FOXF1Q12946 379 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 SNTB1Q13884 538 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 GSTA3Q16772 222 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 PDCD4Q53EL6 469 aaKnown RBP10.38□□□□□ -0.75
RTN3-209ENST00000538995 SLC25A53Q5H9E4 307 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 PDZK1Q5T2W1 519 aa10.38□□□□□ -0.75
RTN3-209ENST00000538995 CBLN3Q6UW01 205 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms