RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TMEM43Q9BTV4 400 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 TEX12Q9BXU0 123 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 OR51V1Q9H2C8 321 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 SRMSQ9H3Y6 488 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 RBFOX1Q9NWB1 397 aaKnown RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 GON4LQ3T8J9 2241 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 TRAV27A0A087WT01 109 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 CHST10O43529 356 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 GYPBP06028 91 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 PAICSP22234 425 aaKnown RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 GDI1P31150 447 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 AGFG1P52594 562 aaKnown RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 ADPRHP54922 357 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 RPS7P62081 194 aaKnown RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 EXOSC7Q15024 291 aaKnown RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 ARL9Q6T311 187 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 C7orf57Q8NEG2 295 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 NR4A3Q92570 626 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 PTP4A1Q93096 173 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 KIR3DX1Q9H7L2 352 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 EXTL2Q9UBQ6 330 aa11.11□□□□□ -0.63
CPNE8-203ENST00000538596 ZNF223Q9UK11 482 aaPredicted RBP11.11□□□□□ -0.63
CPNE8-203ENST00000538596 BHLHE40O14503 412 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 HCN1O60741 890 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PAHP00439 452 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 HLA-DQB1P01920 261 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TFPIP10646 304 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 IL9P15248 144 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SDHBP21912 280 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TSFMP43897 325 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 E2F1Q01094 437 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 RGS1Q08116 209 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ZNF776Q68DI1 518 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ASB18Q6ZVZ8 466 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ZAR1Q86SH2 424 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 YAF2Q8IY57 180 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ACBD7Q8N6N7 88 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 OR51A7Q8NH64 312 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 KISS1RQ969F8 398 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 NDEL1Q9GZM8 345 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 MED17Q9NVC6 651 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 BABAM2Q9NXR7 383 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 CLDND1Q9NY35 253 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 COLEC10Q9Y6Z7 277 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SPTBP11277 2137 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 K7EQS6 105 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 RFPL3O75679 317 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 HMGN1P05114 100 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SLC35G6P0C7Q6 338 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TRAPPC2P0DI81 140 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TRAPPC2BP0DI82 140 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 CPMP14384 443 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PVRP15151 417 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 POLR2CP19387 275 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 RPS15AP62244 130 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PLAURQ03405 335 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SLC3A1Q07837 685 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ACSM1Q08AH1 577 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ENPP2Q13822 863 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 EFR3AQ14156 821 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SYCE2Q6PIF2 218 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 MEPCEQ7L2J0 689 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 C17orf47Q8NEP4 570 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 FLVCR1-AS1Q8TAF5 88 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 GRHL3Q8TE85 626 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TMEM239Q8WW34 195 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 FGF14Q92915 247 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 OR2M4Q96R27 311 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 OR2A5Q96R48 311 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 CD180Q99467 661 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SLX1AQ9BQ83 275 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TMEM168Q9H0V1 697 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 GALNT9Q9HCQ5 603 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 OR6C2Q9NZP2 312 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 USP36Q9P275 1121 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 DAPP1Q9UN19 280 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 DAPL1A0PJW8 107 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TRAPPC13A5PLN9 417 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 MAGEB4O15481 346 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PLRG1O43660 514 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 FGF17O60258 216 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 RGS9O75916 674 aaPredicted RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 EIF4EP06730 217 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 YES1P07947 543 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PRKAR1AP10644 381 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 ZNF24P17028 368 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 DUSP8Q13202 625 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SRSF5Q13243 272 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PRRT3Q5FWE3 981 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 DCST2Q5T1A1 773 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PRPF38BQ5VTL8 546 aaKnown RBP11.1□□□□□ -0.63
CPNE8-203ENST00000538596 PARM1Q6UWI2 310 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 TRILQ7L0X0 811 aa11.1□□□□□ -0.63
CPNE8-203ENST00000538596 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms