RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 CASKO14936 926 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 IGHA1P01876 353 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 RABIFP47224 123 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 LRIT3Q3SXY7 679 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 BRIX1Q8TDN6 353 aaKnown RBP23.08■■□□□ 1.29
RAB40C-204ENST00000538492 HS6ST2Q96MM7 605 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 MED18Q9BUE0 208 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 AKAP8O43823 692 aaKnown RBP23.08■■□□□ 1.29
RAB40C-204ENST00000538492 LYPD3O95274 346 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 BMP7P18075 431 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 GLYR1Q49A26 553 aaPredicted RBP23.08■■□□□ 1.29
RAB40C-204ENST00000538492 DDI2Q5TDH0 399 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 CD200R1LQ6Q8B3 271 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 OR52R1Q8NGF1 315 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 OR13C2Q8NGS9 318 aa23.08■■□□□ 1.29
RAB40C-204ENST00000538492 A8MU76 341 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 BRINP1O60477 761 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 NCR1O76036 304 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 SAGP10523 405 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-204ENST00000538492 ST6GAL1P15907 406 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 TBXA2RP21731 343 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 FGF9P31371 208 aaPredicted RBP23.07■■□□□ 1.28
RAB40C-204ENST00000538492 CASP3P42574 277 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 DAB2P98082 770 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 EIF2B5Q13144 721 aaKnown RBP23.07■■□□□ 1.28
RAB40C-204ENST00000538492 FCRLBQ6BAA4 426 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 THSD4Q6ZMP0 1018 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 ABI3BPQ7Z7G0 1075 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 COMMD3Q9UBI1 195 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 MYO15AQ9UKN7 3530 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 TMEM221A6NGB7 291 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 BHLHE40O14503 412 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 PAICSP22234 425 aaKnown RBP23.07■■□□□ 1.28
RAB40C-204ENST00000538492 SSTR4P31391 388 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 LTBRP36941 435 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 COPZ1P61923 177 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 KLHL12Q53G59 568 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 BPIFA2Q96DR5 249 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 CYP8B1Q9UNU6 501 aa23.07■■□□□ 1.28
RAB40C-204ENST00000538492 TRDV1A0A1B0GX56 115 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CD8B2A6NJW9 211 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 PRAMEF26H0Y7S4 382 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 OR10H2O60403 315 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CBX7O95931 251 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CD8BP10966 210 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 RFX2P48378 723 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 FZD5Q13467 585 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 ZNF322Q6U7Q0 402 aaPredicted RBP23.06■■□□□ 1.28
RAB40C-204ENST00000538492 MARCH9Q86YJ5 346 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CNOT9Q92600 299 aaKnown RBP23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CTHRC1Q96CG8 243 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 TRAV27A0A087WT01 109 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 C2orf92A0A1B0GVN3 265 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 C12orf71A8MTZ7 269 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 AGRPO00253 132 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 CHST10O43529 356 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 TMCC2O75069 709 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 MAP3K8P41279 467 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 HHEXQ03014 270 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 PDZK1Q5T2W1 519 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 NIPAL3Q6P499 406 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 RNF113BQ8IZP6 322 aaKnown RBP23.06■■□□□ 1.28
RAB40C-204ENST00000538492 VWA5B2Q8N398 1253 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 ARIH2OSQ8N7S6 290 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 ITFG2Q969R8 447 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 PTCHD1Q96NR3 888 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 IFT27Q9BW83 186 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 POU2F3Q9UKI9 436 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 MMP17Q9ULZ9 603 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 SLCO1B1Q9Y6L6 691 aa23.06■■□□□ 1.28
RAB40C-204ENST00000538492 SHISA3A0PJX4 238 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 GABRPO00591 440 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 CDC123O75794 336 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-204ENST00000538492 SLC16A1P53985 500 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 KCNJ8Q15842 424 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 VASNQ6EMK4 673 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 ZCCHC12Q6PEW1 402 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 ATP6V1C2Q8NEY4 427 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OR4N2Q8NGD1 307 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OR51A7Q8NH64 312 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 SETD6Q8TBK2 473 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 USP36Q9P275 1121 aaKnown RBP23.05■■□□□ 1.28
RAB40C-204ENST00000538492 KIR2DS5A0A0G2JLQ3 304 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 A0A0G2JNG1 304 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 FAM221BA6H8Z2 402 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OR5K3A6NET4 321 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 KIR2DS3K7RE56 304 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 DVL2O14641 736 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 RFPL3O75679 317 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 CTSEP14091 401 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 NKX2-5P52952 324 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OR2B6P58173 313 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 KIR2DS5Q14953 304 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 MANEAQ5SRI9 462 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OOSP2Q86WS3 158 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 NLGN4YQ8NFZ3 816 aaPredicted RBP23.05■■□□□ 1.28
RAB40C-204ENST00000538492 OR52N1Q8NH53 320 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 NEIL3Q8TAT5 605 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 MARCH7Q9H992 704 aa23.05■■□□□ 1.28
RAB40C-204ENST00000538492 MEPEQ9NQ76 525 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms