RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CDH12P55289 794 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 EEF1A1P68104 462 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GANABQ14697 944 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ATP6AP1Q15904 470 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NTRK2Q16620 822 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LRRC36Q1X8D7 754 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KLHL26Q53HC5 615 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RNF220Q5VTB9 566 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLC30A6Q6NXT4 461 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PAPD5Q8NDF8 572 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 GPR32P1Q8NGA4 272 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR10G3Q8NGC4 313 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR4K17Q8NGC6 315 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OR52J3Q8NH60 311 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 B4GALNT2Q8NHY0 566 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 DUSP19Q8WTR2 217 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CNOT9Q92600 299 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SLCO4A1Q96BD0 722 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SGCZQ96LD1 299 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C5orf34Q96MH7 638 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ZNF300Q96RE9 604 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 NODALQ96S42 347 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ARHGDIGQ99819 225 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 C9orf16Q9BUW7 83 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 OSBPL11Q9BXB4 747 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 TRIM2Q9C040 744 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AMBRA1Q9C0C7 1298 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 PTGES2Q9H7Z7 377 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KRCC1Q9NPI7 259 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SACM1LQ9NTJ5 587 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 FLRT3Q9NZU0 649 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 CNIH4Q9P003 139 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 LRFN1Q9P244 771 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 KIF17Q9P2E2 1029 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 SAMHD1Q9Y3Z3 626 aaKnown RBP9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 ORC6Q9Y5N6 252 aa9.78□□□□□ -0.84
TNFRSF1A-211ENST00000538363 AKAP13Q12802 2813 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 A0A1W2PQD3 144 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TMEM200CA6NKL6 621 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ALG1L2C9J202 215 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 G3V2T6 193 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TPST2O60704 377 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZIC2O95409 532 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 H1F0P07305 194 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NGFRP08138 427 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GP1BBP13224 206 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CD46P15529 392 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 RPS4Y1P22090 263 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 EIF2S3P41091 472 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HLCSP50747 726 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF41P51814 821 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 UCNP55089 124 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 VLDLRP98155 873 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 HOXC5Q00444 222 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ST3GAL3Q11203 375 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CBFBQ13951 182 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TRAM2Q15035 370 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NDUFAF6Q330K2 333 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CRTC2Q53ET0 693 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ENTPD8Q5MY95 495 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PRAMEF20Q5VT98 475 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DESI1Q6ICB0 168 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 H3F3CQ6NXT2 135 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZBTB49Q6ZSB9 765 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PIWIL3Q7Z3Z3 882 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 STK32CQ86UX6 486 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZDHHC13Q8IUH4 622 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SPACA3Q8IXA5 215 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 POGLUT1Q8NBL1 392 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 OR6T1Q8NGN1 323 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 APOBEC4Q8WW27 367 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TM9SF4Q92544 642 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 SLC38A4Q969I6 547 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ARHGAP9Q9BRR9 750 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 LAT2Q9GZY6 243 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ZNF556Q9HAH1 456 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 PLA2G3Q9NZ20 509 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NKX1-2Q9UD57 310 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 TESQ9UGI8 421 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 KCNE5Q9UJ90 142 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 U3KQV3 271 aa9.77□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CENPVL1A0A0U1RR11 272 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 NPIPB9F8W1W9 429 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 G3V3Y1 287 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 H3BNX3 289 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 GNB5O14775 395 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 FADS1O60427 444 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MAN1A2O60476 641 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CDC40O60508 579 aaKnown RBP eCLIP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DNAJB5O75953 348 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CCNB2O95067 398 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 MSX1P28360 303 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 DNAJA1P31689 397 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 IFNGR2P38484 337 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 ADH7P40394 386 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 IDH2P48735 452 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 P2RX1P51575 399 aa9.76□□□□□ -0.85
TNFRSF1A-211ENST00000538363 CRYBA2P53672 197 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms