RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GPR75O95800 540 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 KRT8P05787 483 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 APEX1P27695 318 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TEAD1P28347 426 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 UGT2B10P36537 528 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SLC1A3P43003 542 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CD97P48960 835 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 COPZ1P61923 177 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 RHAGQ02094 409 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 NDUFA9Q16795 377 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 PGGHGQ32M88 737 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 MEDAGQ5VYS4 303 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 OAFQ86UD1 273 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 FAM26EQ8N5C1 309 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZNF655Q8N720 491 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TMEM99Q8N816 258 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZBTB8BQ8NAP8 495 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ATP6V1C2Q8NEY4 427 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 OR6K6Q8NGW6 343 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 NEIL3Q8TAT5 605 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 ZMYND19Q96E35 227 aaPredicted RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 KLHDC7BQ96G42 594 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 C10orf90Q96M02 699 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 TNFRSF13CQ96RJ3 184 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GFM1Q96RP9 751 aaKnown RBP8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GSDMCQ9BYG8 508 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 GRIP1Q9Y3R0 1128 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 CMAHPQ9Y471 501 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 SLC22A7Q9Y694 548 aa8.09□□□□□ -1.11
UBE3B-208ENST00000538070 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 A0A1W2PRG6 482 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 SAGE2PA6NJ88 616 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 HPGDSO60760 199 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 TBX19O60806 448 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 NUDT14O95848 222 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OMPP47874 163 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 CENPAP49450 140 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OR2B6P58173 313 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 MRPS15P82914 257 aaKnown RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF45Q02386 682 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 HTR4Q13639 388 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ZNHIT3Q15649 155 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ODF4Q2M2E3 257 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ASB18Q6ZVZ8 466 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 VWA5B2Q8N398 1253 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 SDR9C7Q8NEX9 313 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 MOAP1Q96BY2 351 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 BPIFA2Q96DR5 249 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 LMF1Q96S06 567 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 GABRG3Q99928 467 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 HDHD2Q9H0R4 259 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 SIDT1Q9NXL6 827 aaKnown RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 KCNE5Q9UJ90 142 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ERVK-19Q9WJR5 959 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 BLOC1S5-TXNDC5H3BN57 136 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 LIMS3P0CW19 117 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 LIMS4P0CW20 117 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 HTR2AP28223 471 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OR1D4P47884 311 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ARL4DP49703 201 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 EMDP50402 254 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 CDK5Q00535 292 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ADAM15Q13444 863 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 PRR23CQ6ZRP0 262 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 SLC44A3Q8N4M1 653 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 KLHL36Q8N4N3 616 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 SIRT6Q8N6T7 355 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 LRRC17Q8N6Y2 441 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OR4C6Q8NH72 309 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 RIT1Q92963 219 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 RFKQ969G6 155 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 CDCA3Q99618 268 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OR8D2Q9GZM6 311 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 DTX4Q9Y2E6 619 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 TRAPPC13A5PLN9 417 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 PRR23D1E9PI22 279 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 PEX14O75381 377 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 APBB3O95704 486 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 PRR23D2P0DMB1 279 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 BMP8BP34820 402 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 RCVRNP35243 200 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 GFERP55789 205 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 MLLT11Q13015 90 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 MLC1Q15049 377 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 EOGTQ5NDL2 527 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 NXNL2Q5VZ03 156 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF619Q8N2I2 560 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 OR13C5Q8NGS8 318 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ORAI1Q96D31 301 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 ERMAPQ96PL5 475 aaPredicted RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 DIMT1Q9UNQ2 313 aaKnown RBP8.08□□□□□ -1.12
UBE3B-208ENST00000538070 MED31Q9Y3C7 131 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 BOLA1Q9Y3E2 137 aa8.08□□□□□ -1.12
UBE3B-208ENST00000538070 A0A0J9YY10 115 aa8.07□□□□□ -1.12
UBE3B-208ENST00000538070 A6NL46 340 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms