RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 MVB12BQ9H7P6 319 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ENPP4Q9Y6X5 453 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 QSER1Q2KHR3 1735 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF646O15015 1829 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MYLKQ15746 1914 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CHD5Q8TDI0 1954 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 BCAT2O15382 392 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 PRODHO43272 600 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 BCL2L11O43521 198 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 NDUFS3O75489 264 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SOX14O95416 240 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CPSF4O95639 269 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ACTL6AO96019 429 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CKBP12277 381 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 HSD3B1P14060 373 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 DPEP1P16444 411 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 RAB5AP20339 215 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SDHBP21912 280 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MTNR1AP48039 350 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SORDQ00796 357 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GLO1Q04760 184 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ACVR1Q04771 509 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MTAPQ13126 283 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ARHGEF7Q14155 803 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GRB14Q14449 540 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF345Q14585 488 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM31Q5JXX7 168 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ARHGAP40Q5TG30 622 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ANXA8L1Q5VT79 327 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF770Q6IQ21 691 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 TSSK4Q6SA08 328 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GAREM2Q75VX8 874 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 DNAJB7Q7Z6W7 309 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 COMTD1Q86VU5 262 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF227Q86WZ6 799 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR5M1Q8NGP8 315 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR9A2Q8NGT5 310 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 OR51Q1Q8NH59 317 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 HAVCR2Q8TDQ0 301 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 THAP4Q8WY91 577 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MED8Q96G25 268 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SCLYQ96I15 445 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZDHHC15Q96MV8 337 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ZNF582Q96NG8 517 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 SLC2A13Q96QE2 648 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MTERF1Q99551 399 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 CDT1Q9H211 546 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 WDCPQ9H6R7 721 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MIEF1Q9NQG6 463 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MMP26Q9NRE1 261 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 FAM120CQ9NX05 1096 aaKnown RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 MBD1Q9UIS9 605 aaPredicted RBP7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 PPT2Q9UMR5 302 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 ST3GAL5Q9UNP4 418 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 GOLT1BQ9Y3E0 138 aa7.98□□□□□ -1.13
SRGAP1-202ENST00000537556 DOCK5Q9H7D0 1870 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM238LA0A1B0GVL6 79 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 GSAPA4D1B5 854 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ACOD1A6NK06 481 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OR6C76A6NM76 312 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ANHXE9PGG2 379 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 J3KTA2 159 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 MAFKO60675 156 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 SH3BGRLO75368 114 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 RPP40O75818 363 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 B3GALT4O96024 378 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OPN1SWP03999 348 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 STAG3L1P0CL83 205 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 LIMS3P0CW19 117 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 LIMS4P0CW20 117 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 EPB42P16452 691 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM11P17152 192 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 PRPS1L1P21108 318 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 GABRR2P28476 465 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 CCR8P51685 355 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OC90Q02509 493 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 RING1Q06587 406 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 GAB1Q13480 694 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 CLINT1Q14677 625 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 NDUFA9Q16795 377 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ADNP2Q6IQ32 1131 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 NR2C2APQ86WQ0 139 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ANGPTL5Q86XS5 388 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM192Q8IY95 271 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OR2AK2Q8NG84 335 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OR56A3Q8NH54 315 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ACER1Q8TDN7 264 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 GCDHQ92947 438 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 LINGO1Q96FE5 620 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 BSCL2Q96G97 398 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 LRIG1Q96JA1 1093 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 OR1F2PQ96R84 312 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 CCNL2Q96S94 520 aaPredicted RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 ALG8Q9BVK2 526 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 SEC61A2Q9H9S3 476 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 TMEM161AQ9NX61 479 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 RCC2Q9P258 522 aaKnown RBP7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 TNFSF13BQ9Y275 285 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 MMACHCQ9Y4U1 282 aa7.97□□□□□ -1.13
SRGAP1-202ENST00000537556 PPP2R3BQ9Y5P8 575 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms