RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 CSTF1Q05048 431 aaKnown RBP13.3□□□□□ -0.28
USP44-203ENST00000537435 SF3A2Q15428 464 aaKnown RBP13.3□□□□□ -0.28
USP44-203ENST00000537435 DCST2Q5T1A1 773 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 PRPF38BQ5VTL8 546 aaKnown RBP13.3□□□□□ -0.28
USP44-203ENST00000537435 ENPP7Q6UWV6 458 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 USP53Q70EK8 1073 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CCL4L1Q8NHW4 92 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 OR1E3Q8WZA6 343 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 KCNJ15Q99712 375 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CERS4Q9HA82 394 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 EXTL2Q9UBQ6 330 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 DAPL1A0PJW8 107 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 OR6C70A6NIJ9 312 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 PEX12O00623 359 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 REM1O75628 298 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 TBXA2RP21731 343 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 NDUFS1P28331 727 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 GDI1P31150 447 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 MTNR1BP49286 362 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CLDN20P56880 219 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 ADAM15Q13444 863 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 Q5BKY6 102 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 TRILQ7L0X0 811 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 TMEFF1Q8IYR6 380 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 SHISA5Q8N114 240 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 OR10H4Q8NGA5 316 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 FLVCR1-AS1Q8TAF5 88 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 TM4SF19Q96DZ7 209 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 CLDND1Q9NY35 253 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 KCNE5Q9UJ90 142 aa13.3□□□□□ -0.28
USP44-203ENST00000537435 C19orf53Q9UNZ5 99 aaPredicted RBP13.3□□□□□ -0.28
USP44-203ENST00000537435 ATG2BQ96BY7 2078 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 LOC102723532A0A0G2JNH3 316 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 LRRC72A6NJI9 287 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 GRXCR1A8MXD5 290 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 CENPBD1B2RD01 187 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SGK494L7N484 410 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 STX11O75558 287 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 LYPD3O95274 346 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 DBIP07108 87 aaKnown RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 CA3P07451 260 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 RPS4Y1P22090 263 aaKnown RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 KIR2DL1P43626 348 aaPredicted RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 ZNF57Q68EA5 555 aaPredicted RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 THSD4Q6ZMP0 1018 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 RNF113BQ8IZP6 322 aaKnown RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 LNX2Q8N448 690 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 YIPF7Q8N8F6 280 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 ACOT12Q8WYK0 555 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 KISS1RQ969F8 398 aaPredicted RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 SLC22A18Q96BI1 424 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 WACQ9BTA9 647 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SYNDIG1Q9H7V2 258 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 CA5BQ9Y2D0 317 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SLC22A7Q9Y694 548 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 A0A0G2JMP0 313 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 A0A0X1KG70 313 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 LDB3O75112 727 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 LAMP2P13473 410 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 NID1P14543 1247 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SHC1P29353 583 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SLC16A1P53985 500 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 RPS7P62081 194 aaKnown RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 FOXK2Q01167 660 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 GALEQ14376 348 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 YIF1BQ5BJH7 314 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 PRRT3Q5FWE3 981 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 C1QTNF12Q5T7M4 302 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 FHL5Q5TD97 284 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 ARL9Q6T311 187 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 TCTE3Q8IZS6 198 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 SLC37A3Q8NCC5 494 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 OR4M2Q8NGB6 313 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 OR13C2Q8NGS9 318 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 OR5W2Q8NH69 310 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 PTP4A1Q93096 173 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 IFT27Q9BW83 186 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 OR51V1Q9H2C8 321 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 PPIL3Q9H2H8 161 aaKnown RBP13.29□□□□□ -0.28
USP44-203ENST00000537435 SLA2Q9H6Q3 261 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 KLHL21Q9UJP4 597 aa13.29□□□□□ -0.28
USP44-203ENST00000537435 CDHR4A6H8M9 788 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 SYNDIG1LA6NDD5 238 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 FAM86C2PA6NEL3 165 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 URADA6NGE7 173 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 K7EQS6 105 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 MRPL3P09001 348 aaKnown RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 ACTR1BP42025 376 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 ACTR1AP61163 376 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
USP44-203ENST00000537435 HBMQ6B0K9 141 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 FCRLBQ6BAA4 426 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 IL20RBQ6UXL0 311 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 COX18Q8N8Q8 333 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 SLX1AQ9BQ83 275 aa13.28□□□□□ -0.28
USP44-203ENST00000537435 MARVELD1Q9BSK0 173 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms