RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 MED12Q93074 2177 aa16.28■□□□□ 0.2
CCDC61-201ENST00000536603 NKX2-6A6NCS4 301 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 NPIPB9F8W1W9 429 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 CCDC22O60826 627 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 ART1P52961 327 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 GFRA1P56159 465 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 PMPCAQ10713 525 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 KLHL26Q53HC5 615 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 COX20Q5RI15 118 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.27■□□□□ 0.2
CCDC61-201ENST00000536603 RTL6Q6ICC9 239 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 MISPQ8IVT2 679 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 ULK2Q8IYT8 1036 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 FITM2Q8N6M3 262 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 ZNF614Q8N883 585 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 PHOSPHO1Q8TCT1 267 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 ROPN1LQ96C74 230 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 C1GALT1C1Q96EU7 318 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 AURKBQ96GD4 344 aaPredicted RBP16.27■□□□□ 0.2
CCDC61-201ENST00000536603 WDYHV1Q96HA8 205 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 SH3YL1Q96HL8 342 aaPredicted RBP16.27■□□□□ 0.2
CCDC61-201ENST00000536603 ZNF559Q9BR84 538 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 TPT1P8Q9HAU6 139 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 HHATLQ9HCP6 504 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 KCNJ16Q9NPI9 418 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 CAMK2AQ9UQM7 478 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 DTNAQ9Y4J8 743 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 PCDHB14Q9Y5E9 798 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 FAM215AQ9Y5M1 114 aa16.27■□□□□ 0.2
CCDC61-201ENST00000536603 CCDC168Q8NDH2 2452 aa16.27■□□□□ 0.19
CCDC61-201ENST00000536603 PRAMEF27A3QJZ7 478 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 H3BNH8 94 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 GABRA1P14867 456 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 MSX1P28360 303 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 CHRNB4P30926 498 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 STARP49675 285 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 ANXA11P50995 505 aaKnown RBP16.26■□□□□ 0.19
CCDC61-201ENST00000536603 TXNL4AP83876 142 aaKnown RBP16.26■□□□□ 0.19
CCDC61-201ENST00000536603 FUT5Q11128 374 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 GANABQ14697 944 aaKnown RBP16.26■□□□□ 0.19
CCDC61-201ENST00000536603 GPAT3Q53EU6 434 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 PAGE3Q5JUK9 113 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 PDZK1Q5T2W1 519 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 C1orf185Q5T7R7 199 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 RAET1LQ5VY80 246 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 AAGABQ6PD74 315 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 ARSKQ6UWY0 536 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 B3GNT6Q6ZMB0 384 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 PM20D2Q8IYS1 436 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 RND1Q92730 232 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 TTYH2Q9BSA4 534 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 PRDM14Q9GZV8 571 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF350Q9GZX5 532 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 PAIP1Q9H074 479 aaKnown RBP16.26■□□□□ 0.19
CCDC61-201ENST00000536603 SLAMF8Q9P0V8 285 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 KCNE5Q9UJ90 142 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 RNF6Q9Y252 685 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 WDR45Q9Y484 360 aa16.26■□□□□ 0.19
CCDC61-201ENST00000536603 HCFC1P51610 2035 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 A0A096LPI6 279 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 AHRRA9YTQ3 701 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 GTPBP1O00178 669 aaKnown RBP16.25■□□□□ 0.19
CCDC61-201ENST00000536603 HCRTR2O43614 444 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 UGT2B17O75795 530 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 HOXD4P09016 255 aaPredicted RBP16.25■□□□□ 0.19
CCDC61-201ENST00000536603 CHMP24386 653 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 CRATP43155 626 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 MVDP53602 400 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 NUP107P57740 925 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 B3GALT5-AS1P59052 145 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 SRYQ05066 204 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF141Q15928 474 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 SYPL1Q16563 259 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 TYW3Q6IPR3 259 aaKnown RBP16.25■□□□□ 0.19
CCDC61-201ENST00000536603 ENPP6Q6UWR7 440 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 ANKFN1Q8N957 763 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 ACBD4Q8NC06 268 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 OR5M1Q8NGP8 315 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 B4GALNT2Q8NHY0 566 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 TREX2Q9BQ50 279 aaPredicted RBP16.25■□□□□ 0.19
CCDC61-201ENST00000536603 UCK2Q9BZX2 261 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 LIPT1Q9Y234 373 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 VDAC3Q9Y277 283 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 CAPN7Q9Y6W3 813 aa16.25■□□□□ 0.19
CCDC61-201ENST00000536603 CENPVL1A0A0U1RR11 272 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 A0A1W2PP18 115 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 OIP5O43482 229 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 TNFRSF21O75509 655 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 DCTN3O75935 186 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 H6PDO95479 791 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 GUSBP08236 651 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 GLI4P10075 376 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 ETFAP13804 333 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 LHX2P50458 406 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 HPCAP84074 193 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 ZNF117Q03924 483 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 CHRNEQ04844 493 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 MYBPHQ13203 477 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 CBLN3Q6UW01 205 aa16.24■□□□□ 0.19
CCDC61-201ENST00000536603 FRRS1Q6ZNA5 592 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms