RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 H0YC42 278 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 RPS4Y1P22090 263 aaKnown RBP16.18■□□□□ 0.18
DDX55-204ENST00000536079 PGM1P36871 562 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 MAGEA8P43361 318 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 LHX2P50458 406 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 ANXA11P50995 505 aaKnown RBP16.18■□□□□ 0.18
DDX55-204ENST00000536079 TPD52P55327 224 aaPredicted RBP16.18■□□□□ 0.18
DDX55-204ENST00000536079 CLDN15P56746 228 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 SKP2Q13309 424 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 CDSNQ15517 529 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 PLPPR5Q32ZL2 321 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 SEM1Q6ZVN7 128 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 MTERF4Q7Z6M4 381 aaKnown RBP16.18■□□□□ 0.18
DDX55-204ENST00000536079 PIGWQ7Z7B1 504 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 MISPQ8IVT2 679 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 ULK2Q8IYT8 1036 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 SFXN2Q96NB2 322 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 A4GALTQ9NPC4 353 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 ZNF337Q9Y3M9 751 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 DSPPQ9NZW4 1301 aa16.18■□□□□ 0.18
DDX55-204ENST00000536079 GTPBP1O00178 669 aaKnown RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 MRASO14807 208 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 EFNA2O43921 213 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 LINGO3P0C6S8 592 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 UBL4AP11441 157 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 IL11P20809 199 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 MSX1P28360 303 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 ADSLP30566 484 aaPredicted RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 CASP6P55212 293 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 CLDN18P56856 261 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 SRYQ05066 204 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 FADDQ13158 208 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 GANABQ14697 944 aaKnown RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 ZNF630Q2M218 657 aaPredicted RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 GCNT6Q5T4J0 391 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 WLSQ5T9L3 541 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 RAET1LQ5VY80 246 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 VRK2Q86Y07 508 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 PTOV1Q86YD1 416 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 FAM71CQ8NEG0 241 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 NFKBIDQ8NI38 313 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 GPR119Q8TDV5 335 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 SSC4DQ8WTU2 575 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 CNOT9Q92600 299 aaKnown RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 TREX2Q9BQ50 279 aaPredicted RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 PRDM14Q9GZV8 571 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 LAT2Q9GZY6 243 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 NSRP1Q9H0G5 558 aaKnown RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 TP63Q9H3D4 680 aaPredicted RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 PTGES2Q9H7Z7 377 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 MTHFD2LQ9H903 347 aaPredicted RBP16.17■□□□□ 0.18
DDX55-204ENST00000536079 CAMK2AQ9UQM7 478 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 CHST2Q9Y4C5 530 aa16.17■□□□□ 0.18
DDX55-204ENST00000536079 MYO7BQ6PIF6 2116 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 E9PLN8 166 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 ZNF264O43296 627 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 CCDC22O60826 627 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 CYP7B1O75881 506 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 ACTL6AO96019 429 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 CSTAP01040 98 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 UBTFL6P0CB48 400 aaPredicted RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 ARAFP10398 606 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 COX4I1P13073 169 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 PSMA4P25789 261 aaKnown RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 ACVR2AP27037 513 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 ADH7P40394 386 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 GZMMP51124 257 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 P2RX1P51575 399 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 SUCLG1P53597 346 aaKnown RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 NUP107P57740 925 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 KCNJ10P78508 379 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 HPCAP84074 193 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 CYLC2Q14093 348 aaPredicted RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 TRMT5Q32P41 509 aaKnown RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 RABL3Q5HYI8 236 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 NANOGP8Q6NSW7 305 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 RPTNQ6XPR3 784 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 ITLN2Q8WWU7 325 aaPredicted RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 LRRC58Q96CX6 371 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 RCN3Q96D15 328 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 VKORC1Q9BQB6 163 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 THUMPD3Q9BV44 507 aaKnown RBP16.16■□□□□ 0.18
DDX55-204ENST00000536079 RAD21L1Q9H4I0 556 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 NANOGQ9H9S0 305 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 USP22Q9UPT9 525 aa16.16■□□□□ 0.18
DDX55-204ENST00000536079 H3BNH8 94 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 SLC22A2O15244 555 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 EIF4E2O60573 245 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 DNAJA2O60884 412 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 OPN1LWP04000 364 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 GLI4P10075 376 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 ESRRAP11474 423 aaPredicted RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 ZNF708P17019 499 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 PPIBP23284 216 aaKnown RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 CHMP24386 653 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 CRISP3P54108 245 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 FOXF1Q12946 379 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 GLYR1Q49A26 553 aaPredicted RBP16.15■□□□□ 0.18
DDX55-204ENST00000536079 COQ5Q5HYK3 327 aa16.15■□□□□ 0.18
DDX55-204ENST00000536079 C1orf185Q5T7R7 199 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms