RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NPAS1Q99742 590 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 GLS2Q9UI32 602 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 ATG4BQ9Y4P1 393 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 PGRMC2O15173 223 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 PPM1DO15297 605 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 LRRTM2O43300 516 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 RAB36O95755 333 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 F3P13726 295 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 MYOGP15173 224 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 BUD31P41223 144 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-203ENST00000535977 AKR1D1P51857 326 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 LASP1Q14847 261 aaKnown RBP16.73■□□□□ 0.27
RAB40C-203ENST00000535977 RPE65Q16518 533 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 OR6T1Q8NGN1 323 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 ATOH1Q92858 354 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-203ENST00000535977 CNRIP1Q96F85 164 aaPredicted RBP16.73■□□□□ 0.27
RAB40C-203ENST00000535977 SEC22CQ9BRL7 303 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 PRR14Q9BWN1 585 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 GHITMQ9H3K2 345 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 MAN2C1Q9NTJ4 1040 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 SERGEFQ9UGK8 458 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 KIF25Q9UIL4 384 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 NOSIPQ9Y314 301 aaKnown RBP16.73■□□□□ 0.27
RAB40C-203ENST00000535977 ZNF780BQ9Y6R6 833 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 COL4A3Q01955 1670 aa16.73■□□□□ 0.27
RAB40C-203ENST00000535977 TRAV6A0A075B6T7 132 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 GSAPA4D1B5 854 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 LGALS8O00214 317 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 TLX2O43763 284 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-203ENST00000535977 AIFM1O95831 613 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 SLC6A1P30531 599 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 WASP42768 502 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 CTBP2P56545 445 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 EFNB1P98172 346 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 OVCH2Q7RTZ1 564 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 CCDC116Q8IYX3 515 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 SAMD14Q8IZD0 417 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-203ENST00000535977 KCTD7Q96MP8 289 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 WFDC6Q9BQY6 131 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 APOOQ9BUR5 198 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 FBRSQ9HAH7 460 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 OR6C2Q9NZP2 312 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 PHF11Q9UIL8 331 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 SESN1Q9Y6P5 492 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 C2orf16Q68DN1 1984 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 PLRG1O43660 514 aaKnown RBP16.72■□□□□ 0.27
RAB40C-203ENST00000535977 IGFBP1P08833 259 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-203ENST00000535977 FOSL1P15407 271 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 CAMK2DQ13557 499 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 ITPRIPL2Q3MIP1 535 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 ZNF425Q6IV72 752 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 IQCHQ86VS3 1027 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 STPG2Q8N412 459 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 TMEM163Q8TC26 289 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 GANCQ8TET4 914 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 FAM131CQ96AQ9 280 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 CDCA3Q99618 268 aaPredicted RBP16.72■□□□□ 0.27
RAB40C-203ENST00000535977 ISYNA1Q9NPH2 558 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 SZT2Q5T011 3432 aa16.72■□□□□ 0.27
RAB40C-203ENST00000535977 DUXAA6NLW8 204 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 GMDSO60547 372 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 AGR2O95994 175 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 HOXC4P09017 264 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-203ENST00000535977 MAOBP27338 520 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 AVPR1BP47901 424 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 EVX1P49640 407 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 FLI1Q01543 452 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-203ENST00000535977 TRAM2Q15035 370 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 PLA1AQ53H76 456 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 C2orf27AQ580R0 203 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 C3orf38Q5JPI3 329 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 KANSL1Q7Z3B3 1105 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 MRGPREQ86SM8 312 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 SCMH1Q96GD3 660 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 ARHGDIGQ99819 225 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 ZCCHC4Q9H5U6 513 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 KLHL28Q9NXS3 571 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 TESQ9UGI8 421 aaKnown RBP16.71■□□□□ 0.27
RAB40C-203ENST00000535977 FBXW2Q9UKT8 454 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 PPIEQ9UNP9 301 aaKnown RBP16.71■□□□□ 0.27
RAB40C-203ENST00000535977 A0A1W2PQU0 124 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 C7orf66A4D0T2 115 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 GLOD5A6NK44 160 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 M0R233 179 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 LDOC1O95751 146 aaPredicted RBP16.71■□□□□ 0.27
RAB40C-203ENST00000535977 DNASE1P24855 282 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 S100A12P80511 92 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 FUT5Q11128 374 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 ST3GAL3Q11203 375 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 ETFDHQ16134 617 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 HSD17B12Q53GQ0 312 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 SYT14P1Q58G82 188 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 ZNF311Q5JNZ3 666 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 CACUL1Q86Y37 369 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 NRROSQ86YC3 692 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 PM20D2Q8IYS1 436 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 NUP43Q8NFH3 380 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 OR2T4Q8NH00 348 aa16.71■□□□□ 0.27
RAB40C-203ENST00000535977 TEX47Q8TBZ9 253 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms