RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 OR4C3Q8NH37 302 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PHOSPHO1Q8TCT1 267 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ACMSDQ8TDX5 336 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NANOS1Q8WY41 292 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GSTO2Q9H4Y5 243 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SH3BP4Q9P0V3 963 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PCNX3Q9H6A9 2034 aa11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-207ENST00000535958 A8MV72 311 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 OVOL3O00110 214 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 RGS14O43566 566 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ADAM11O75078 769 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GCM2O75603 506 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 URI1O94763 535 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 KCNK2O95069 426 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ADAP00813 363 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 DANCRP0C864 163 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NUDT6P53370 316 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CDH11P55287 796 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 POU6F2P78424 691 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ITGADQ13349 1161 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 P2RY6Q15077 328 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NRF1Q16656 503 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 WHAMMP3Q1A5X7 153 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SSX8Q7RTT4 187 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 TRIM46Q7Z4K8 759 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 TDRPQ86YL5 185 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GABRG1Q8N1C3 465 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SLC43A2Q8N370 569 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 TMCO5AQ8N6Q1 288 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZNF614Q8N883 585 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ATP6V1C2Q8NEY4 427 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZFP90Q8TF47 636 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CIDECQ96AQ7 238 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ARL8AQ96BM9 186 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 MUCL1Q96DR8 90 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 METTL2AQ96IZ6 378 aaKnown RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 RHNO1Q9BSD3 238 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GP6Q9HCN6 339 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 KLHL9Q9P2J3 617 aa11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PSMC3IPQ9P2W1 217 aaPredicted RBP11.54□□□□□ -0.56
TNFRSF1A-207ENST00000535958 A0A1W2PQD3 144 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GTPBP1O00178 669 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SLC28A1O00337 649 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 AKAP10O43572 662 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GLRA3O75311 464 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CHEK2O96017 543 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 IGHV4-39P01824 125 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 YES1P07947 543 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ABHD2P08910 425 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 UROSP10746 265 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ACP2P11117 423 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NEFHP12036 1026 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PSMA4P25789 261 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 PPA1Q15181 289 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 DUSP5Q16690 384 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CCNJQ5T5M9 372 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 AGAP6Q5VW22 663 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZCCHC12Q6PEW1 402 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CLEC2AQ6UVW9 174 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FRMD7Q6ZUT3 714 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NUFIP2Q7Z417 695 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 MTERF4Q7Z6M4 381 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 HIPK1Q86Z02 1210 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 SLC16A11Q8NCK7 471 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 MNS1Q8NEH6 495 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 OR2W6PQ8NHA6 318 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NEUROG1Q92886 237 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 OTUB1Q96FW1 271 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZNF764Q96H86 408 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ADAD1Q96M93 576 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 NPAS1Q99742 590 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CCT7Q99832 543 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 REEP4Q9H6H4 257 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 ZCCHC3Q9NUD5 404 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 C1orf109Q9NX04 203 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 CISD1Q9NZ45 108 aaKnown RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 DCDC2Q9UHG0 476 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 POU2F3Q9UKI9 436 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 FIS1Q9Y3D6 152 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 GPC6Q9Y625 555 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 STAB1Q9NY15 2570 aa11.53□□□□□ -0.56
TNFRSF1A-207ENST00000535958 UBFD1O14562 309 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF195O14628 629 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SSX4O60224 188 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LYZL6O75951 148 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 NTN1O95631 604 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 LINGO3P0C6S8 592 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 HPCAL1P37235 193 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 P2RX1P51575 399 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CCR4P51679 360 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SUMO3P55854 103 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 RPL38P63173 70 aaKnown RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZNF117Q03924 483 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 SELENBP1Q13228 472 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 CD226Q15762 336 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 TMEM176BQ3YBM2 270 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 ZYG11AQ6WRX3 759 aa11.52□□□□□ -0.57
TNFRSF1A-207ENST00000535958 Q6ZT83 130 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms