RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ZFP28Q8NHY6 868 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PNPT1Q8TCS8 783 aaKnown RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PHOSPHO1Q8TCT1 267 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 PGM2Q96G03 612 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 WFIKKN1Q96NZ8 548 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 HS3ST6Q96QI5 342 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 RBM24Q9BX46 236 aaKnown RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 BHLHE41Q9C0J9 482 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 OR51I1Q9H343 314 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 MEAF6Q9HAF1 191 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 C3orf14Q9HBI5 128 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 RASSF1Q9NS23 344 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 KLHL28Q9NXS3 571 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ASIC5Q9NY37 505 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 C6orf203Q9P0P8 240 aaPredicted RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 ICAM5Q9UMF0 924 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 EIF3LQ9Y262 564 aaKnown RBP8.64□□□□□ -1.03
SSBP3-215ENST00000533946 GPR45Q9Y5Y3 372 aa8.64□□□□□ -1.03
SSBP3-215ENST00000533946 RNF103-CHMP3A0A140T963 221 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 TM9SF1O15321 606 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 ZWINTO95229 277 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 H6PDO95479 791 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 THBDP07204 575 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 IFI6P09912 130 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 MATN1P21941 496 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 LOXP28300 417 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 OPRM1P35372 400 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 CPOXP36551 454 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 SERPINB5P36952 375 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 EIF1AXP47813 144 aaKnown RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 C21orf58P58505 322 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 OCRLQ01968 901 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 GANABQ14697 944 aaKnown RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 CASP8Q14790 479 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 GPR68Q15743 365 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 BCL2A1Q16548 175 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 SYPL1Q16563 259 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 FAM174BQ3ZCQ3 159 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 FLYWCH1Q4VC44 716 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 TTMPQ5BVD1 217 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 AAGABQ6PD74 315 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 R3HCC1LQ7Z5L2 792 aaKnown RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 CAMKMTQ7Z624 323 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 C10orf111Q8N326 155 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF614Q8N883 585 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 ANKFN1Q8N957 763 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 B4GALNT2Q8NHY0 566 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 FBXO27Q8NI29 283 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 GPR119Q8TDV5 335 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 POLDIP3Q9BY77 421 aaKnown RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 DPY30Q9C005 99 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 CLEC4MQ9H2X3 399 aaPredicted RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 COQ10BQ9H8M1 238 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 RNF122Q9H9V4 155 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 NEUROD4Q9HD90 331 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 SLCO1B3Q9NPD5 702 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 UBQLN4Q9NRR5 601 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 DUSP22Q9NRW4 184 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 AIG1Q9NVV5 245 aa8.63□□□□□ -1.03
SSBP3-215ENST00000533946 NOP53Q9NZM5 478 aaKnown RBP8.63□□□□□ -1.03
SSBP3-215ENST00000533946 TUBAL3A6NHL2 446 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ENO4A6NNW6 628 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 AP3D1O14617 1153 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 UGT2B17O75795 530 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 IL18BPO95998 194 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 HRGP04196 525 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 NGFRP08138 427 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 MYZAPP0CAP1 466 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 EPXP11678 715 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 LBPP18428 481 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ENPP1P22413 925 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 MAPK1P28482 360 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 NTF4P34130 210 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ART1P52961 327 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 CHRNEQ04844 493 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 EXOC3L2Q2M3D2 409 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 TYW3Q6IPR3 259 aaKnown RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 DNAJC14Q6Y2X3 702 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 NUFIP2Q7Z417 695 aaKnown RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 P4HA3Q7Z4N8 544 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 GTPBP8Q8N3Z3 284 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 METTL25Q8N6Q8 603 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 OR8J2Q8NGG1 315 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 SFXN5Q8TD22 340 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ADAMTS15Q8TE58 950 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ABHD3Q8WU67 409 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 AURKBQ96GD4 344 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ZC3HAV1LQ96H79 300 aaKnown RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 SLC35G5Q96KT7 338 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 STACQ99469 402 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 TM9SF2Q99805 663 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 PLEKHF2Q9H8W4 249 aa8.62□□□□□ -1.03
SSBP3-215ENST00000533946 ING1Q9UK53 422 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.62□□□□□ -1.03
SSBP3-215ENST00000533946 DEFB108AA8MXU0 73 aa8.61□□□□□ -1.03
SSBP3-215ENST00000533946 ZNF814B7Z6K7 855 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms