RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CCM2LQ9NUG4 571 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ASIC5Q9NY37 505 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 MARCOQ9UEW3 520 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 CLEC4AQ9UMR7 237 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 CARD8Q9Y2G2 431 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 PLEKHA6Q9Y2H5 1048 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.39□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF175Q9Y473 711 aa9.39□□□□□ -0.91
CAPN1-225ENST00000533704 A0A1W2PQD3 144 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 TMEM120BA0PK00 339 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 TNFSF11O14788 317 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 MSTNO14793 375 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 CASKO14936 926 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 CYP7B1O75881 506 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 AQP8O94778 261 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 SYNGR4O95473 234 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 KITP10721 976 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 FCGR2AP12318 317 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 POU2F1P14859 743 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 DNASE1P24855 282 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 SFTPDP35247 375 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 KIR2DL2P43627 348 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-225ENST00000533704 SLC6A8P48029 635 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 CTBP2P56545 445 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 FAM27E3Q08E93 113 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 FOXF1Q12946 379 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 DAZAP2Q15038 168 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-225ENST00000533704 GPR68Q15743 365 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 EXOC3L2Q2M3D2 409 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 TMEM44Q2T9K0 475 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 SMU1Q2TAY7 513 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 CBLN3Q6UW01 205 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 C16orf62Q7Z3J2 963 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 GTPBP8Q8N3Z3 284 aaPredicted RBP9.38□□□□□ -0.91
CAPN1-225ENST00000533704 METTL25Q8N6Q8 603 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 ATP6V1C2Q8NEY4 427 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 OR10D3Q8NH80 312 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 ACTRT2Q8TDY3 377 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 RNF122Q9H9V4 155 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 KLHL28Q9NXS3 571 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 NDRG3Q9UGV2 375 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 MCTS1Q9ULC4 181 aaKnown RBP9.38□□□□□ -0.91
CAPN1-225ENST00000533704 PROCRQ9UNN8 238 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 ACTL7BQ9Y614 415 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 PRR14LQ5THK1 2151 aa9.38□□□□□ -0.91
CAPN1-225ENST00000533704 CELSR1Q9NYQ6 3014 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ROS1P08922 2347 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 GOLGA8QA0A0J9YX86 632 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 GOLGA8OA6NCC3 632 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 C9JVG2 144 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 GOLGA8NF8WBI6 632 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 RNASET2O00584 256 aaKnown RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ERLIN1O75477 346 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SOX30O94993 753 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SNUPNO95149 360 aaKnown RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 IL11P20809 199 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 S100A3P33764 101 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 CHI3L1P36222 383 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 CD79BP40259 229 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ATP12AP54707 1039 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 WDR4P57081 412 aaKnown RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 C21orf58P58505 322 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 RAC1P63000 192 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 TESK1Q15569 626 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 KLHL26Q53HC5 615 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 TNFAIP8L3Q5GJ75 292 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SPANXN4Q5MJ08 99 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 PDSS1Q5T2R2 415 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 PDZK1Q5T2W1 519 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ATAD3BQ5T9A4 648 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ANXA8L1Q5VT79 327 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 HBMQ6B0K9 141 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 NXNQ6DKJ4 435 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 TNFAIP8L2Q6P589 184 aaPredicted RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 CAMKMTQ7Z624 323 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 KIRREL3Q8IZU9 778 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 LILRA2Q8N149 483 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ZNF610Q8N9Z0 462 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 OR2V1Q8NHB1 315 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 FBXO27Q8NI29 283 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 POC1BQ8TC44 478 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 RAB8BQ92930 207 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ARSGQ96EG1 525 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 ZC3HAV1LQ96H79 300 aaKnown RBP9.37□□□□□ -0.91
CAPN1-225ENST00000533704 KLHL15Q96M94 604 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 DACH2Q96NX9 599 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SDF2Q99470 211 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SLC39A3Q9BRY0 314 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 MED18Q9BUE0 208 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 KLHL4Q9C0H6 718 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 OR51I1Q9H343 314 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 SERHL2Q9H4I8 314 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 NKIRAS1Q9NYS0 192 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 MKLN1Q9UL63 735 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 EDARQ9UNE0 448 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 EMC9Q9Y3B6 208 aa9.37□□□□□ -0.91
CAPN1-225ENST00000533704 C2CD3Q4AC94 2353 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms