RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 UEVLDQ8IX04 471 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 DRAXINQ8NBI3 349 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-205ENST00000533464 EGLN3Q9H6Z9 239 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 LRIT1Q9P2V4 623 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 MGAT4CQ9UBM8 478 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 CBLCQ9ULV8 474 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 RPL3LQ92901 407 aaKnown RBP16.45■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF471Q9BX82 626 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-205ENST00000533464 FOLH1BQ9HBA9 442 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 NUP205Q92621 2012 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 K7ESM1 405 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 OR2T1O43869 369 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 PRKRAO75569 313 aaKnown RBP16.45■□□□□ 0.22
PHRF1-205ENST00000533464 SSTR4P31391 388 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 REEP5Q00765 189 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 OR4F15Q8NGB8 312 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 CHTF18Q8WVB6 975 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 TRIM43Q96BQ3 446 aaPredicted RBP16.45■□□□□ 0.22
PHRF1-205ENST00000533464 TM4SF18Q96CE8 201 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 MAB21L2Q9Y586 359 aa16.45■□□□□ 0.22
PHRF1-205ENST00000533464 LYRM1O43325 122 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 GRK5P34947 590 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 BCL2L15Q5TBC7 163 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 FAM111BQ6SJ93 734 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 NEDD4LQ96PU5 975 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF350Q9GZX5 532 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 PSMB10P40306 273 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 NKX2-5P52952 324 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-205ENST00000533464 LPAL2Q16609 132 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 DNAJC22Q8N4W6 341 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 OR5J2Q8NH18 312 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 OLIG1Q8TAK6 271 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 OR10A4Q9H209 315 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 RANBP3Q9H6Z4 567 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-205ENST00000533464 TRAV18A0A075B6X5 111 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 CDC14CA4D256 554 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 OR1D4P47884 311 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 CXCL12P48061 93 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 POU3F4P49335 361 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 TNFRSF17Q02223 184 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 TMEM52BQ4KMG9 183 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 ACSM3Q53FZ2 586 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 PYHIN1Q6K0P9 492 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 DLEU7Q6UYE1 221 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 PCDHGA3Q9Y5H0 932 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 TVP23AA6NH52 213 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 CREBL2O60519 120 aaPredicted RBP16.44■□□□□ 0.22
PHRF1-205ENST00000533464 FNTBP49356 437 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 TSPAN31Q12999 210 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF77Q15935 545 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 HMBOX1Q6NT76 420 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 SRPK3Q9UPE1 567 aa16.44■□□□□ 0.22
PHRF1-205ENST00000533464 SRPX2O60687 465 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 RIN1Q13671 783 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 LTB4RQ15722 352 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 OR2G6Q5TZ20 316 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 GPR137CQ8N3F9 429 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 VN1R2Q8NFZ6 395 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 HOXB13Q92826 284 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 FAM46BQ96A09 425 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 GLIPR2Q9H4G4 154 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 I6L893 689 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF195O14628 629 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 RAD51DO75771 328 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 CD3GP09693 182 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 FOSL2P15408 326 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 ATF4P18848 351 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 CSNK1G2P78368 415 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 RNASE10Q5GAN6 216 aaKnown RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 FIP1L1Q6UN15 594 aaKnown RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF700Q9H0M5 742 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 SLC6A17Q9H1V8 727 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 TREM1Q9NP99 234 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 KLHL9Q9P2J3 617 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 KIAA1551Q9HCM1 1747 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 KRBA1A5PL33 1030 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 CRABP1P29762 137 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 PITPNBP48739 271 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 TBPL2Q6SJ96 375 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 PLPP6Q8IY26 295 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 LMF2Q9BU23 707 aaKnown RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 UBQLN4Q9NRR5 601 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 SLC5A10A0PJK1 596 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 ZNF16P17020 682 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 MAT1AQ00266 395 aaKnown RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 KIAA0895LQ68EN5 471 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 NEURL3Q96EH8 262 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 C4orf36Q96KX1 117 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 LYSMD1Q96S90 227 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 BABAM2Q9NXR7 383 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 RPH3AQ9Y2J0 694 aaPredicted RBP16.43■□□□□ 0.22
PHRF1-205ENST00000533464 KCNIP3Q9Y2W7 256 aa16.43■□□□□ 0.22
PHRF1-205ENST00000533464 HOXC11O43248 304 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-205ENST00000533464 B4GALT3O60512 393 aa16.42■□□□□ 0.22
PHRF1-205ENST00000533464 ACP2P11117 423 aa16.42■□□□□ 0.22
PHRF1-205ENST00000533464 AMY2BP19961 511 aa16.42■□□□□ 0.22
PHRF1-205ENST00000533464 ARRB2P32121 409 aa16.42■□□□□ 0.22
PHRF1-205ENST00000533464 MEPCEQ7L2J0 689 aaKnown RBP16.42■□□□□ 0.22
PHRF1-205ENST00000533464 GPR148Q8TDV2 347 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms