RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 VPS29Q9UBQ0 182 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 TMEFF2Q9UIK5 374 aaPredicted RBP6.86□□□□□ -1.31
NXF1-215ENST00000533440 POU2F3Q9UKI9 436 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 PCTPQ9UKL6 214 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 SLC25A15Q9Y619 301 aa6.86□□□□□ -1.31
NXF1-215ENST00000533440 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.86□□□□□ -1.31
NXF1-215ENST00000533440 LOC390937A0A1W2PQ73 354 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 GXYLT2A0PJZ3 443 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 SERINC4A6NH21 518 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 TTC36A6NLP5 189 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 STX16-NPEPL1H3BU86 382 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 STX16O14662 325 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 NDUFB5O43674 189 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 EFNA2O43921 213 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 KLHL2O95198 593 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 OXSR1O95747 527 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 ENPP1P22413 925 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ELK4P28324 431 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 APOBEC3AP31941 199 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 SFTPDP35247 375 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 SRP14P37108 136 aaKnown RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 MAP3K8P41279 467 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 EIF1P41567 113 aaKnown RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 RFX3P48380 749 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZNF41P51814 821 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 RAE1P78406 368 aaKnown RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 DR1Q01658 176 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 HEPACAMQ14CZ8 416 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZNHIT3Q15649 155 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZSWIM7Q19AV6 140 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 SWI5Q1ZZU3 235 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 PRSS53Q2L4Q9 553 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 MST1LQ2TV78 715 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 TECRLQ5HYJ1 363 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 TCHHL1Q5QJ38 904 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 PRR31Q5SQ13 230 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 LETMD1Q6P1Q0 360 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 KLHL17Q6TDP4 642 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 TMEM107Q6UX40 140 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 C3orf62Q6ZUJ4 267 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 CTAGE3PQ8IX95 158 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 C3orf56Q8N813 242 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 CDYL2Q8N8U2 506 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZNF540Q8NDQ6 660 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 OR4C3Q8NH37 302 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 C16orf78Q8WTQ4 265 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZNF75CPQ92670 426 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 HOXB13Q92826 284 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 RNF166Q96A37 237 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 C3orf49Q96BT1 292 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 PHF21BQ96EK2 531 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 SORCS2Q96PQ0 1159 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 C3orf14Q9HBI5 128 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 MYOZ1Q9NP98 299 aaPredicted RBP6.85□□□□□ -1.31
NXF1-215ENST00000533440 KLHL9Q9P2J3 617 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 ZNF225Q9UK10 706 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 FKBP7Q9Y680 259 aa6.85□□□□□ -1.31
NXF1-215ENST00000533440 HMX2A2RU54 273 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GJE1A6NN92 205 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ZNF724A8MTY0 619 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 FAM157AC9JC47 383 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 PPP6CO00743 305 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ZNF195O14628 629 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 EIF3HO15372 352 aaKnown RBP eCLIP6.84□□□□□ -1.31
NXF1-215ENST00000533440 PCDH7O60245 1069 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 NKX2-2O95096 273 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 KCNH1O95259 989 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 JUNP05412 331 aaKnown RBP6.84□□□□□ -1.31
NXF1-215ENST00000533440 GSTA2P09210 222 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 IFI6P09912 130 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 HSD3B1P14060 373 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 HSD3B2P26439 372 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GABRA3P34903 492 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ZNF83P51522 516 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 NCBP2P52298 156 aaKnown RBP eCLIP6.84□□□□□ -1.31
NXF1-215ENST00000533440 RAC3P60763 192 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ACTG1P63261 375 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 FOXF1Q12946 379 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 SLC29A2Q14542 456 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 IQCCQ4KMZ1 466 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GLE1Q53GS7 698 aaKnown RBP6.84□□□□□ -1.31
NXF1-215ENST00000533440 FAM219BQ5XKK7 198 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GALNT18Q6P9A2 607 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 MISPQ8IVT2 679 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 PPM1NQ8N819 430 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GATSQ8NAP1 163 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 OR52N5Q8NH56 324 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ZFP90Q8TF47 636 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 PIK3R3Q92569 461 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 ELP4Q96EB1 424 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 BBS4Q96RK4 519 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 TRIM31Q9BZY9 425 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 BPESC1Q9GZL8 116 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 GLIPR2Q9H4G4 154 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 MYNNQ9NPC7 610 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 DDX18Q9NVP1 670 aaKnown RBP6.84□□□□□ -1.31
NXF1-215ENST00000533440 TAS2R7Q9NYW3 318 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 NTMQ9P121 344 aa6.84□□□□□ -1.31
NXF1-215ENST00000533440 DMGDHQ9UI17 866 aaKnown RBP6.84□□□□□ -1.31
NXF1-215ENST00000533440 GRID1Q9ULK0 1009 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms