RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 TMEM120AQ9BXJ8 343 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 PINK1Q9BXM7 581 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 DPY30Q9C005 99 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 CXXC4Q9H2H0 198 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 PIGMQ9H3S5 423 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 SDR39U1Q9NRG7 319 aaPredicted RBP17.04■□□□□ 0.32
SSH3-209ENST00000532600 ZCCHC3Q9NUD5 404 aaKnown RBP17.04■□□□□ 0.32
SSH3-209ENST00000532600 GPATCH2Q9NW75 528 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 VDAC3Q9Y277 283 aa17.04■□□□□ 0.32
SSH3-209ENST00000532600 NUP214P35658 2090 aaPredicted RBP17.04■□□□□ 0.32
SSH3-209ENST00000532600 AQP8O94778 261 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 C6orf47O95873 294 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 CGAP01215 116 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 IDO1P14902 403 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 PON3Q15166 354 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 PGS1Q32NB8 556 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 SPANXN4Q5MJ08 99 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 METTL25Q8N6Q8 603 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 COX18Q8N8Q8 333 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 OR9I1Q8NGQ6 314 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 POC1BQ8TC44 478 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 OR5P2Q8WZ92 322 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 SMPDL3BQ92485 455 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 NINJ1Q92982 152 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 CHMP6Q96FZ7 201 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 ADGRG7Q96K78 797 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 BTBD2Q9BX70 525 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 ZNF385DQ9H6B1 395 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 PLEKHF2Q9H8W4 249 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 RNF122Q9H9V4 155 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 PLEKHA6Q9Y2H5 1048 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 AP4B1Q9Y6B7 739 aa17.03■□□□□ 0.32
SSH3-209ENST00000532600 ZNF469Q96JG9 3925 aaPredicted RBP17.03■□□□□ 0.32
SSH3-209ENST00000532600 LINC01387J3KSC0 135 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 OIP5O43482 229 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 NDUFB5O43674 189 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 SCN2BO60939 215 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 CRHP06850 196 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 IL11P20809 199 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 DRD4P21917 467 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 RPL3P39023 403 aaKnown RBP17.02■□□□□ 0.32
SSH3-209ENST00000532600 SLC6A8P48029 635 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 CPA2P48052 419 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 MRPL19P49406 292 aaKnown RBP17.02■□□□□ 0.32
SSH3-209ENST00000532600 PRIM2P49643 509 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 FAM27E3Q08E93 113 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 GSTA3Q16772 222 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 CTU2Q2VPK5 515 aaKnown RBP17.02■□□□□ 0.32
SSH3-209ENST00000532600 PLPPR5Q32ZL2 321 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 OR4F3Q6IEY1 312 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 P4HA3Q7Z4N8 544 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 JADE3Q92613 823 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 TESCQ96BS2 214 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 STACQ99469 402 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 FOXC2Q99958 501 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 SIKE1Q9BRV8 207 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 BHLHE41Q9C0J9 482 aaPredicted RBP17.02■□□□□ 0.32
SSH3-209ENST00000532600 OPN3Q9H1Y3 402 aaPredicted RBP17.02■□□□□ 0.32
SSH3-209ENST00000532600 PIGUQ9H490 435 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 UBQLN4Q9NRR5 601 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 DUSP22Q9NRW4 184 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 MED17Q9NVC6 651 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 SNX8Q9Y5X2 465 aa17.02■□□□□ 0.32
SSH3-209ENST00000532600 SETD2Q9BYW2 2564 aaPredicted RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 NPIPA5A0A0B4J1W7 369 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 NPIPA7E9PJI5 369 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 MSTNO14793 375 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 OPN1LWP04000 364 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 HRGP04196 525 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 NPIPA8P0DM63 369 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 TROVE2P10155 538 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSH3-209ENST00000532600 ZNF17P17021 662 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 CCKARP32238 428 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 CCT3P49368 545 aaKnown RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 RNF144AP50876 292 aaPredicted RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 GNGT1P63211 74 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 POU6F2P78424 691 aaPredicted RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 FAM174BQ3ZCQ3 159 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.01■□□□□ 0.31
SSH3-209ENST00000532600 OR2A2Q6IF42 318 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 CDC73Q6P1J9 531 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 CHMP1BQ7LBR1 199 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 CLECL1Q8IZS7 167 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 GTPBP8Q8N3Z3 284 aaPredicted RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 CNEP1R1Q8N9A8 125 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 OR8J2Q8NGG1 315 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 C10orf82Q8WW14 230 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 ZNF524Q96C55 264 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 SH3YL1Q96HL8 342 aaPredicted RBP17.01■□□□□ 0.31
SSH3-209ENST00000532600 DACH2Q96NX9 599 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 DUSP26Q9BV47 211 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 SERHL2Q9H4I8 314 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 GIN1Q9NXP7 522 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 ZIM2Q9NZV7 527 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 ZNF175Q9Y473 711 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 TESMINQ9Y4I5 508 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 NF1P21359 2839 aa17.01■□□□□ 0.31
SSH3-209ENST00000532600 A0A1W2PQD3 144 aa17■□□□□ 0.31
SSH3-209ENST00000532600 C7orf72A4D263 438 aa17■□□□□ 0.31
SSH3-209ENST00000532600 SH3D21A4FU49 640 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms