RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 ADAMTS15Q8TE58 950 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 CDS1Q92903 461 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 EFHD2Q96C19 240 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-204ENST00000531326 AURKBQ96GD4 344 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-204ENST00000531326 TMEM41AQ96HV5 264 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 ALPK1Q96QP1 1244 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 TRIB1Q96RU8 372 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 OR51I1Q9H343 314 aa16.21■□□□□ 0.19
PTPN11-204ENST00000531326 FOXD3Q9UJU5 478 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-204ENST00000531326 FLNAP21333 2647 aaKnown RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MBD3L4A6NDZ8 208 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MBD3L3A6NE82 208 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 OR6C70A6NIJ9 312 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MBD3L5A6NJ08 208 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 CD8B2A6NJW9 211 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 GNB5O14775 395 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 ANGPT2O15123 496 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 KCNK2O95069 426 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 IL33O95760 270 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MAPRE2Q15555 327 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 DECR1Q16698 335 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 TIGD3Q6B0B8 471 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 TNFAIP8L2Q6P589 184 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 PAMR1Q6UXH9 720 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 NUP54Q7Z3B4 507 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 COX18Q8N8Q8 333 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 ANKS4BQ8N8V4 417 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MBD3L2Q8NHZ7 208 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 PNPT1Q8TCS8 783 aaKnown RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 MBD6Q96DN6 1003 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 LRRC46Q96FV0 321 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 NODALQ96S42 347 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 ADOQ96SZ5 270 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 BTBD2Q9BX70 525 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 GSX1Q9H4S2 264 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-204ENST00000531326 TPT1P8Q9HAU6 139 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 FBXO34Q9NWN3 711 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 JKAMPQ9P055 326 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 VAPAQ9P0L0 249 aa16.2■□□□□ 0.18
PTPN11-204ENST00000531326 LOC100653049A0A140TA62 436 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 TUBAL3A6NHL2 446 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 ABCB7O75027 752 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 KRT34O76011 436 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 KCNH1O95259 989 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 KRT75O95678 551 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 EPXP11678 715 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 CYP4B1P13584 511 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 CTSSP25774 331 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 KRT20P35900 424 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 PTGDSP41222 190 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 PNLIPRP2P54317 469 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 ADAM8P78325 824 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 POU6F2P78424 691 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-204ENST00000531326 TOMM20Q15388 145 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 COQ5Q5HYK3 327 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 COX20Q5RI15 118 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 GKAP1Q5VSY0 366 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-204ENST00000531326 FIGNL1Q6PIW4 674 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 C9orf106Q8NAJ2 232 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 FAM83FQ8NEG4 500 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-204ENST00000531326 LINC01560Q8TB33 94 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 RNF138Q8WVD3 245 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 RAB8BQ92930 207 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 ABTB1Q969K4 478 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-204ENST00000531326 FLRT3Q9NZU0 649 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 RPH3AQ9Y2J0 694 aaPredicted RBP16.19■□□□□ 0.18
PTPN11-204ENST00000531326 GMEB1Q9Y692 573 aa16.19■□□□□ 0.18
PTPN11-204ENST00000531326 DUXAA6NLW8 204 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 BBIP1A8MTZ0 92 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 HMGN4O00479 90 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 SOX30O94993 753 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 OR12D1P0DN82 309 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 IL12BP29460 328 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 KHKP50053 298 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 CYLC2Q14093 348 aaPredicted RBP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 EFR3AQ14156 821 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 DCST2Q5T1A1 773 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 CCNJQ5T5M9 372 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 REP15Q6BDI9 236 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 HEPHL1Q6MZM0 1159 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 TMEM81Q6P7N7 255 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 ANGPTL8Q6UXH0 198 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 ZAR1Q86SH2 424 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 DHDDSQ86SQ9 333 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 GALNT10Q86SR1 603 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 YRDCQ86U90 279 aaKnown RBP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 POU5F2Q8N7G0 328 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 OR1J4Q8NGS1 313 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 RP9Q8TA86 221 aaKnown RBP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 CALHM2Q9HA72 323 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 GALNT9Q9HCQ5 603 aa16.18■□□□□ 0.18
PTPN11-204ENST00000531326 MRTO4Q9UKD2 239 aaKnown RBP16.18■□□□□ 0.18
PTPN11-204ENST00000531326 PRAMEF27A3QJZ7 478 aa16.17■□□□□ 0.18
PTPN11-204ENST00000531326 C2orf72A6NCS6 295 aa16.17■□□□□ 0.18
PTPN11-204ENST00000531326 EEF1E1-BLOC1S5C9J1V9 151 aa16.17■□□□□ 0.18
PTPN11-204ENST00000531326 CLIC1O00299 241 aa16.17■□□□□ 0.18
PTPN11-204ENST00000531326 EEF1E1O43324 174 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms