RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 TMEM184BQ9Y519 407 aaPredicted RBP5.2□□□□□ -1.58
CD44-231ENST00000531110 VWDEQ8N2E2 1590 aa5.2□□□□□ -1.58
CD44-231ENST00000531110 MYH14Q7Z406 1995 aaKnown RBP5.2□□□□□ -1.58
CD44-231ENST00000531110 KIF13BQ9NQT8 1826 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 A0A075B6Q4 140 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 A0A1B0GVI7 797 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 PLSCR5A0PG75 271 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 GAGE12JA6NER3 117 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PGPEP1LA6NFU8 196 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NPIPB13A6NJU9 1138 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NPIPB5A8MRT5 1133 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 A8MV72 311 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 ARHGEF33A8MVX0 844 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 FOXO6A8MYZ6 492 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NPIPB4C9JG80 1138 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ANHXE9PGG2 379 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 TEX46H3BTG2 121 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 M0R3G1 203 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 RHODO00212 210 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SIGLEC5O15389 551 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HCN1O60741 890 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CREG1O75629 220 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 BCAS2O75934 225 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 AK1P00568 194 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PIGRP01833 764 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 RLN2P04090 185 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PCCAP05165 728 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 TSPAN19P0C672 248 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NBEAP1P0C6P0 100 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 G6PDP11413 515 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CKMT1AP12532 417 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 MYOGP15173 224 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HMGB2P26583 209 aaKnown RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 EPHA8P29322 1005 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 DDTP30046 118 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 EPHX2P34913 555 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 MPIP34949 423 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 AHRP35869 848 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CAPZBP47756 277 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CEBPDP49716 269 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 NT5C2P49902 561 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 MAZP56270 477 aaKnown RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 VLDLRP98155 873 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CDKL1Q00532 357 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 MC1RQ01726 317 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SLC18A2Q05940 514 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ELP6Q0PNE2 266 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 MAD2L1Q13257 205 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 IL18Q14116 193 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PIGHQ14442 188 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 KRT33BQ14525 404 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HEPACAMQ14CZ8 416 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 TMED2Q15363 201 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SLC1A5Q15758 541 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CHI3L2Q15782 390 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CTF1Q16619 201 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 DECR1Q16698 335 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 BSXQ3C1V8 233 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CTXN3Q4LDR2 81 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ACTBL2Q562R1 376 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 LRIF1Q5T3J3 769 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 C9orf135Q5VTT2 229 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NKAIN2Q5VXU1 208 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 LAMTOR1Q6IAA8 161 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 JADE1Q6IE81 842 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 AADACL2Q6P093 401 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CYHR1Q6ZMK1 362 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 KCTD8Q6ZWB6 473 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PLPPR4Q7Z2D5 763 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 PAGE2Q7Z2X7 111 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 LHFPL4Q7Z7J7 247 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SERINC5Q86VE9 423 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NAXDQ8IW45 347 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ADHFE1Q8IWW8 467 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 FAM71AQ8IYT1 594 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ZNF283Q8N7M2 679 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 FBXO36Q8NEA4 188 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 BPIFB6Q8NFQ5 453 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 OR2M7Q8NG81 312 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 OR5M1Q8NGP8 315 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 C9orf43Q8TAL5 461 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 BBS10Q8TAM1 723 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ADAMTS15Q8TE58 950 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 ZFP90Q8TF47 636 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 LCN9Q8WX39 176 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 KIAA1143Q96AT1 154 aaPredicted RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 MRPL38Q96DV4 380 aaKnown RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 LINGO1Q96FE5 620 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SPATA13Q96N96 652 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 TEFMQ96QE5 360 aaKnown RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 FRG2BQ96QU4 278 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CPXM1Q96SM3 734 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 CPNE1Q99829 537 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 TUBGCP2Q9BSJ2 902 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 NAT9Q9BTE0 207 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 HDHD5Q9BXW7 423 aa5.19□□□□□ -1.58
CD44-231ENST00000531110 SLIRPQ9GZT3 109 aaKnown RBP5.19□□□□□ -1.58
CD44-231ENST00000531110 SRRQ9GZT4 340 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms