RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 SMAD2Q15796 467 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 DUSP5Q16690 384 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 RGS21Q2M5E4 152 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PRICKLE4Q2TBC4 344 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LRIT3Q3SXY7 679 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZNF404Q494X3 552 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MINDY4Q4G0A6 757 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SYT14P1Q58G82 188 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 DCST2Q5T1A1 773 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SFRP5Q5T4F7 317 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 YOD1Q5VVQ6 348 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 TYW3Q6IPR3 259 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 FAM180BQ6P0A1 224 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 FAM111BQ6SJ93 734 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 Q6ZNX1 250 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TRIM73Q86UV7 250 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 C17orf82Q86X59 251 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 LACC1Q8IV20 430 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MCATQ8IVS2 390 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 GID4Q8IVV7 300 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZNF440Q8IYI8 595 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CDK20Q8IZL9 346 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 OR4N4Q8N0Y3 316 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CA13Q8N1Q1 262 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ARHGEF39Q8N4T4 335 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TMCO5AQ8N6Q1 288 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SLC16A11Q8NCK7 471 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 OR6Q1Q8NGQ2 317 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MCFD2Q8NI22 146 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZCCHC10Q8TBK6 192 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 BRIX1Q8TDN6 353 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 SLC9A6Q92581 669 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 KAT2AQ92830 837 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CDS1Q92903 461 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 FGF11Q92914 225 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 UBE2FQ969M7 185 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PLPPR2Q96GM1 343 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 C16orf58Q96GQ5 468 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ZDHHC12Q96GR4 267 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SLC41A3Q96GZ6 507 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MCHR1Q99705 422 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MACROD1Q9BQ69 325 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ORAI3Q9BRQ5 295 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LMF2Q9BU23 707 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 G6PC3Q9BUM1 346 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LRRC61Q9BV99 259 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TAPBPLQ9BX59 468 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 GPR174Q9BXC1 333 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TRIM2Q9C040 744 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 SLIRPQ9GZT3 109 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 WNT10AQ9GZT5 417 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 UBE2ZQ9H832 354 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 SYNPO2LQ9H987 977 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 EQTNQ9NQ60 294 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 FAIMQ9NVQ4 179 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 ETAA1Q9NY74 926 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 MAT2BQ9NZL9 334 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 RHCGQ9UBD6 479 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CRNNQ9UBG3 495 aaPredicted RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 WNT16Q9UBV4 365 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PRODH2Q9UF12 536 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PLCL2Q9UPR0 1127 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 LSM2Q9Y333 95 aaKnown RBP5.16□□□□□ -1.58
PCF11-205ENST00000530906 MMACHCQ9Y4U1 282 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 UGT2A1Q9Y4X1 527 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PCDHGA3Q9Y5H0 932 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 PEX16Q9Y5Y5 336 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CSNK1G3Q9Y6M4 447 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 CDH10Q9Y6N8 788 aa5.16□□□□□ -1.58
PCF11-205ENST00000530906 TMEM131Q92545 1883 aa5.15□□□□□ -1.58
PCF11-205ENST00000530906 FITM1A5D6W6 292 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 METTL15A6NJ78 407 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 EFCAB7A8K855 629 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 H3BQ06 376 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 CHP2O43745 196 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 FGF17O60258 216 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SNX4O95219 450 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 SOX14O95416 240 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZBTB11O95625 1053 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 PTHP01270 115 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 STATHP02808 62 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 EIF2S1P05198 315 aaKnown RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 MSL3P1P0C860 447 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ALPPL2P10696 532 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 CD53P19397 219 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TNNI3P19429 210 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GADD45AP24522 165 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 TRHRP34981 398 aaPredicted RBP5.15□□□□□ -1.59
PCF11-205ENST00000530906 OPRL1P41146 370 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ETV6P41212 452 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 GPR3P46089 330 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 OMPP47874 163 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 AVPR1BP47901 424 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 MTNR1AP48039 350 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 LSSP48449 732 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 ZNF136P52737 540 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 PPP5CP53041 499 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 NUDT6P53370 316 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 CTBP2P56545 445 aa5.15□□□□□ -1.59
PCF11-205ENST00000530906 WNT4P56705 351 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms