RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 PRG2P13727 222 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 UQCRBP14927 111 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RHCEP18577 417 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MASP1P48740 699 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SESN3P58005 492 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TAS2R41P59536 307 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 COPZ1P61923 177 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ARG2P78540 354 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SPIBQ01892 262 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF117Q03924 483 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SLC34A1Q06495 639 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C17orf67Q0P5P2 114 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 MFAP5Q13361 173 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SNTA1Q13424 505 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PIN1Q13526 163 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GANABQ14697 944 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR1C1Q15619 314 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NPTX1Q15818 432 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ATP6AP1Q15904 470 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FNDC7Q5VTL7 733 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR2T5Q6IEZ7 315 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PLEKHM3Q6ZWE6 761 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PACS2Q86VP3 889 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GRAMD2AQ8IUY3 354 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 APLFQ8IW19 511 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CADM2Q8N3J6 435 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ICA1LQ8NDH6 482 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TOR1AIP2Q8NFQ8 470 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR2T29Q8NH02 315 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 B4GALNT2Q8NHY0 566 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF563Q8TA94 476 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PAQR8Q8TEZ7 354 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZCCHC14Q8WYQ9 949 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SLC35B4Q969S0 331 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ARSGQ96EG1 525 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CENPNQ96H22 339 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 JSRP1Q96MG2 331 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PIP5K1AQ99755 562 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 BDH2Q9BUT1 245 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 FNDC11Q9BVV2 318 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OSBPL11Q9BXB4 747 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ANGPTL4Q9BY76 406 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RTN4RQ9BZR6 473 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 ZNF552Q9H707 407 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RNPEPL1Q9HAU8 725 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 HHATLQ9HCP6 504 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 GALNT9Q9HCQ5 603 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SELENONQ9NZV5 590 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 C6orf203Q9P0P8 240 aaPredicted RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 STX18Q9P2W9 335 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RHCGQ9UBD6 479 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 RPS6KB2Q9UBS0 482 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CNOT11Q9UKZ1 510 aaKnown RBP7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 NTNG1Q9Y2I2 539 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 SSUH2Q9Y2M2 353 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 TESMINQ9Y4I5 508 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 PCSK5Q92824 1860 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 CROCCQ5TZA2 2017 aa7.78□□□□□ -1.16
NEDD8-MDP1-201ENST00000530579 OR5H15A6NDH6 313 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 FAM47E-STBD1D6RA91 191 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 K7ENP7 123 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TNFRSF11BO00300 401 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CDK2AP1O14519 115 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GNB5O14775 395 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CDC40O60508 579 aaKnown RBP eCLIP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TPST2O60704 377 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 E2F6O75461 281 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SNX4O95219 450 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CD46P15529 392 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CNR1P21554 472 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MSX1P28360 303 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 RRM2P31350 389 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ACAA2P42765 397 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 MAGEA2P43356 314 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SLC6A8P48029 635 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 IDH2P48735 452 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 P2RX1P51575 399 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ZNF136P52737 540 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 GAS1P54826 345 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CDH12P55289 794 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SMIM11AP58511 58 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CXADRP78310 365 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 EPS8Q12929 822 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PPP1R8Q12972 351 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SKP2Q13309 424 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR1Q1Q15612 314 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 COL28A1Q2UY09 1125 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 ENTPD8Q5MY95 495 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 SLC25A25Q6KCM7 469 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 HMBOX1Q6NT76 420 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 BORAQ6PGQ7 559 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 INO80CQ6PI98 192 aaPredicted RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 CBLN3Q6UW01 205 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 TSEN54Q7Z6J9 526 aaKnown RBP7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 LILRA2Q8N149 483 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 PSD4Q8NDX1 1056 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR4K17Q8NGC6 315 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR52J3Q8NH60 311 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 OR5W2Q8NH69 310 aa7.77□□□□□ -1.17
NEDD8-MDP1-201ENST00000530579 NR4A3Q92570 626 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms