RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 VPS26BQ4G0F5 336 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 TMEM108Q6UXF1 575 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 Q6ZT83 130 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 FCRLAQ7L513 359 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 NUFIP2Q7Z417 695 aaKnown RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 ATG4DQ86TL0 474 aaPredicted RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 TRABD2AQ86V40 505 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 P2RY8Q86VZ1 359 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 CTAGE4Q8IX94 777 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 LILRA2Q8N149 483 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 SLC43A2Q8N370 569 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 TMEM151AQ8N4L1 468 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ZNF525Q8N782 197 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ARIH2OSQ8N7S6 290 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 CDC26Q8NHZ8 85 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 GPR151Q8TDV0 419 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 RNF128Q8TEB7 428 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 ABHD3Q8WU67 409 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 DHRS9Q9BPW9 319 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 LMF2Q9BU23 707 aaKnown RBP7.97□□□□□ -1.13
VPS11-203ENST00000529545 MANSC1Q9H8J5 431 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 MIEF1Q9NQG6 463 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 MED17Q9NVC6 651 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 SAR1BQ9Y6B6 198 aa7.97□□□□□ -1.13
VPS11-203ENST00000529545 LOC100289279A0A1B0GTE1 492 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 CCDC151A5D8V7 595 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 ALG1L2C9J202 215 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 UPK1AO00322 258 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 KIAA0513O60268 411 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 LYZL6O75951 148 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 NGFRP08138 427 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 RPS17P08708 135 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 DHRS4L1P0CG22 281 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 IGHV4-31P0DP07 118 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 TSPAN8P19075 237 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 GGT1P19440 569 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 DDCP20711 480 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 TIA1P31483 386 aaKnown RBP eCLIP7.96□□□□□ -1.14
VPS11-203ENST00000529545 GSK3AP49840 483 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 FABP6P51161 128 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 PLTPP55058 493 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 MRPS25P82663 173 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 SRSF2Q01130 221 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 CHRNB3Q05901 458 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 SLC18A2Q05940 514 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 C2orf80Q0P641 193 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 SLC29A2Q14542 456 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 PLPPR5Q32ZL2 321 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 TIMM23BQ5SRD1 257 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 FAM120AOSQ5T036 256 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 SLC22A25Q6T423 547 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 KLHL17Q6TDP4 642 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 APOOLQ6UXV4 268 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 Q6ZSR9 355 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 RPS27LQ71UM5 84 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 MISPQ8IVT2 679 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 PLD6Q8N2A8 252 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 OR2L13Q8N349 312 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 MUC15Q8N387 334 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 GATSQ8NAP1 163 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 METTL6Q8TCB7 284 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 C10orf105Q8TEF2 133 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 ZNF483Q8TF39 744 aaPredicted RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 SH3YL1Q96HL8 342 aaPredicted RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 IQCGQ9H095 443 aaKnown RBP7.96□□□□□ -1.14
VPS11-203ENST00000529545 KLHL9Q9P2J3 617 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 RNF14Q9UBS8 474 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 PMF1-BGLAPU3KQ54 211 aa7.96□□□□□ -1.14
VPS11-203ENST00000529545 ALPK2Q86TB3 2170 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 CUBNO60494 3623 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 GXYLT2A0PJZ3 443 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 HMX2A2RU54 273 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 ZNF814B7Z6K7 855 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 H7C417 338 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PPP6CO00743 305 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PSMG1O95456 288 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 OXSR1O95747 527 aaPredicted RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 NUDT14O95848 222 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PRPS2P11908 318 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 COL6A2P12110 1019 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 CHN1P15882 459 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 IGFBP5P24593 272 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PTAFRP25105 342 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PSMA4P25789 261 aaKnown RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 ELK4P28324 431 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 PHBP35232 272 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 OR3A2P47893 321 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 EFNA4P52798 201 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 MANFP55145 182 aaKnown RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 RAE1P78406 368 aaKnown RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 CLCQ05315 142 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 BTKQ06187 659 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 ZNF763Q0D2J5 394 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 GLE1Q53GS7 698 aaKnown RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 ARL13AQ5H913 290 aaPredicted RBP7.95□□□□□ -1.14
VPS11-203ENST00000529545 SPDYAQ5MJ70 313 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 GALNT18Q6P9A2 607 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 SEZ6L2Q6UXD5 910 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 C12orf54Q6X4T0 127 aa7.95□□□□□ -1.14
VPS11-203ENST00000529545 IL17RELQ6ZVW7 336 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms