RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 H2BFMP0C1H6 154 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TPMTP51580 245 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 PDX1P52945 283 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 SEC23BQ15437 767 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 INAVAQ3KP66 663 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NKAIN2Q5VXU1 208 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 RAET1LQ5VY80 246 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 DRAXINQ8NBI3 349 aaPredicted RBP14.38□□□□□ -0.11
USP35-203ENST00000529308 TANKQ92844 425 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 LRRN3Q9H3W5 708 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NUFIP1Q9UHK0 495 aaKnown RBP14.38□□□□□ -0.11
USP35-203ENST00000529308 RARRES3Q9UL19 164 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 A0A1W2PR48 441 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 DCDC2BA2VCK2 349 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ZNF81P51508 661 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NTRK2Q16620 822 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ALG10Q5BKT4 473 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TCTE1Q5JU00 501 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ADAMTSL4Q6UY14 1074 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TBC1D15Q8TC07 691 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NEURL3Q96EH8 262 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ZNF576Q9H609 170 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 SYNPO2LQ9H987 977 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 H7C1C5 153 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 LINC01565O15544 149 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NR4A2P43354 598 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ADPRHP54922 357 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 LCN6P62502 163 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 PPP2CBP62714 309 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 PPP2CAP67775 309 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TBCEQ15813 527 aaPredicted RBP14.38□□□□□ -0.11
USP35-203ENST00000529308 LRIF1Q5T3J3 769 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TMEM150AQ86TG1 271 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 TBC1D20Q96BZ9 403 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ELP4Q96EB1 424 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 ATG5Q9H1Y0 275 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 MOV10Q9HCE1 1003 aaKnown RBP14.38□□□□□ -0.11
USP35-203ENST00000529308 PLEKHA6Q9Y2H5 1048 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 NOP16Q9Y3C1 178 aaKnown RBP14.38□□□□□ -0.11
USP35-203ENST00000529308 GPR179Q6PRD1 2367 aa14.38□□□□□ -0.11
USP35-203ENST00000529308 A0A1B0GVI7 797 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ASPDHA6ND91 283 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 METTL21EPA6NDL7 271 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 YY2O15391 372 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ACTC1P68032 377 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ACTA1P68133 377 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 RELAQ04206 551 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZP2Q05996 745 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF181Q2M3W8 571 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 RPL13AP3Q6NVV1 102 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 KCTD9Q7L273 389 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF227Q86WZ6 799 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF431Q8TF32 576 aaPredicted RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 TMEM255BQ8WV15 326 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 RSC1A1Q92681 617 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ITFG2Q969R8 447 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ALG14Q96F25 216 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 C4orf36Q96KX1 117 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 CRB3Q9BUF7 120 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 FAIMQ9NVQ4 179 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 SCN3AQ9NY46 2000 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 LOC105369274A0A096LPK9 316 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 AGAP5A6NIR3 686 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 MEN1O00255 615 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF432O94892 652 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 CSTBP04080 98 aaKnown RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 PLGLB1Q02325 96 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 BTBD16Q32M84 506 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ADPRMQ3LIE5 342 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 PRAMEF17Q5VTA0 474 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 KIAA1211LQ6NV74 962 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 IQCF2Q8IXL9 164 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 OR4N4Q8N0Y3 316 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ZNF775Q96BV0 537 aaPredicted RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 TNFRSF13CQ96RJ3 184 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 HDAC8Q9BY41 377 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 C6orf106Q9H6K1 298 aaPredicted RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 TRPV4Q9HBA0 871 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 EPHA6Q9UF33 1036 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 SERGEFQ9UGK8 458 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ELAVL4P26378 380 aaKnown RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 BCL7AQ4VC05 210 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 FBXL6Q8N531 539 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 DNAJA4Q8WW22 397 aaPredicted RBP14.37□□□□□ -0.11
USP35-203ENST00000529308 EPHX3Q9H6B9 360 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 ATP13A2Q9NQ11 1180 aa14.37□□□□□ -0.11
USP35-203ENST00000529308 GTF2F2P13984 249 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 CD22P20273 847 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 MMP11P24347 488 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 STOMP27105 288 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 HOXA9P31269 272 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 KCNJ5P48544 419 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 CEBPGP53567 150 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 PYCR3Q53H96 274 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 SDK2Q58EX2 2172 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 NKAIN4Q8IVV8 208 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 OR2T4Q8NH00 348 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 OR5W2Q8NH69 310 aa14.36□□□□□ -0.11
USP35-203ENST00000529308 MUL1Q969V5 352 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms