RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GTF2A1LQ9UNN4 478 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 KCTD3Q9Y597 815 aa5.44□□□□□ -1.54
CD44-225ENST00000527326 CFAP20Q9Y6A4 193 aaKnown RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 ZNF646O15015 1829 aaPredicted RBP5.44□□□□□ -1.54
CD44-225ENST00000527326 KCPQ6ZWJ8 1503 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ABHD14A-ACY1A0A1B0GW23 586 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 TRDV1A0A1B0GX56 115 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 A0A1W2PPE3 182 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 IRGMA1A4Y4 181 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 KLRG2A4D1S0 409 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 TBC1D3BA6NDS4 549 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 A8MWP6 167 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TISP43B9A030 160 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 C9JVG2 144 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 RPL36A-HNRNPH2H7BZ11 118 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 GFRA2O00451 464 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 WNT9AO14904 365 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ARPC5O15511 151 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 RRP8O43159 456 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 CREBL2O60519 120 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 CTNSO60931 367 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SH3BGRLO75368 114 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CRCPO75575 148 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 C4BPAP04003 597 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 SEMG1P04279 462 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 GSTP1P09211 210 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 CD3GP09693 182 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 BPIP17213 487 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ERCC2P18074 760 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 RAB5AP20339 215 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SAT1P21673 171 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 FGF7P21781 194 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 NME2P22392 152 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CYP2F1P24903 491 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 AKT1P31749 480 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 FEN1P39748 380 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 GDNFP39905 211 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 WNT5AP41221 380 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 MAGEB1P43366 347 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 PITPNBP48739 271 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 DLX5P56178 289 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 AP3S2P59780 193 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OR2B8PP59922 312 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OSTNP61366 133 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 UFM1P61960 85 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 LSM6P62312 80 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 RBX1P62877 108 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 PPIAP62937 165 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 SIGLEC14Q08ET2 396 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 LCP2Q13094 533 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SURF2Q15527 256 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 FAM187BQ17R55 369 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ZSWIM7Q19AV6 140 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 C14orf28Q4W4Y0 310 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 XKR7Q5GH72 579 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ELFN2Q5R3F8 820 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 IDNKQ5T6J7 187 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 BSPRYQ5W0U4 402 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TBC1D3GQ6DHY5 549 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 C22orf42Q6IC83 251 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 APOBEC3HQ6NTF7 200 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 ACSM5Q6NUN0 579 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SLC16A14Q7RTX9 510 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 DCXRQ7Z4W1 244 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 WDR53Q7Z5U6 358 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 CALHM3Q86XJ0 350 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 XYLT1Q86Y38 959 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ZNF619Q8N2I2 560 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 HSD17B11Q8NBQ5 300 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CHST14Q8NCH0 376 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ACVR1CQ8NER5 493 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OR5M3Q8NGP4 307 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OR1J4Q8NGS1 313 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OR52P1PQ8NH57 321 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 OR10A6Q8NH74 314 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 MRGPRDQ8TDS7 321 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TFGQ92734 400 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 RGMAQ96B86 450 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 CMTM7Q96FZ5 175 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TCTN2Q96GX1 697 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 C12orf66Q96MD2 445 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ACBD6Q9BR61 282 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 PIGQQ9BRB3 760 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 MXRA8Q9BRK3 442 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 ADPGKQ9BRR6 497 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 TMEM208Q9BTX3 173 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 THUMPD3Q9BV44 507 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 CHIAQ9BZP6 476 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 POLR2J2Q9GZM3 115 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 C20orf85Q9H1P6 137 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 UBQLN3Q9H347 655 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 PTGES2Q9H7Z7 377 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 METTL8Q9H825 291 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 SFXN1Q9H9B4 322 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 SEPSECSQ9HD40 501 aaKnown RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 MID1IP1Q9NPA3 183 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 FZD3Q9NPG1 666 aa5.43□□□□□ -1.54
CD44-225ENST00000527326 KRCC1Q9NPI7 259 aaPredicted RBP5.43□□□□□ -1.54
CD44-225ENST00000527326 LHX9Q9NQ69 397 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms