RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CLIC1O00299 241 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 AQP7O14520 342 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 ACOX3O15254 700 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 SUSD5O60279 629 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 TNFRSF21O75509 655 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PPM1BO75688 479 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 KCNK2O95069 426 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 NUDT7P0C024 238 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 OR12D1P0DN82 309 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CCL3P10147 92 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 BMP2P12643 396 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 GPX2P18283 190 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PRIM2P49643 509 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 GAS1P54826 345 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 MRPS22P82650 360 aaKnown RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CYLC2Q14093 348 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 RGNQ15493 299 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 ADRM1Q16186 407 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CYP27C1Q4G0S4 372 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 COQ5Q5HYK3 327 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CCNJQ5T5M9 372 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 C6orf163Q5TEZ5 329 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 FNDC7Q5VTL7 733 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 BICRALQ6AI39 1079 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 REP15Q6BDI9 236 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 OPN5Q6U736 354 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 DNAJC14Q6Y2X3 702 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CYP4Z2PQ8N1L4 340 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CCDC197Q8NCU1 140 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 OR10G3Q8NGC4 313 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PNPT1Q8TCS8 783 aaKnown RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 SPPL2AQ8TCT8 520 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 BCAS4Q8TDM0 211 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PAQR8Q8TEZ7 354 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 RAB8BQ92930 207 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 ZG16BQ96DA0 208 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 SPACA9Q96E40 222 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 ANKRD27Q96NW4 1050 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 SDF2Q99470 211 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CGREF1Q99674 301 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 CPPED1Q9BRF8 314 aaPredicted RBP9.9□□□□□ -0.82
NEDD8-204ENST00000526430 SLC39A3Q9BRY0 314 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 DUSP22Q9NRW4 184 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PCDHGB3Q9Y5G1 929 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 DYSFO75923 2080 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 ROS1P08922 2347 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 PKD1L1Q8TDX9 2849 aa9.9□□□□□ -0.82
NEDD8-204ENST00000526430 A0A0G2JMM0 328 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 A0A1W2PPB8 328 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 A0A1W2PRS3 328 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 MBD3L4A6NDZ8 208 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 OR6C70A6NIJ9 312 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 MBD3L5A6NJ08 208 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 TTC36A6NLP5 189 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 C17orf51A8MQB3 221 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 KIR3DP1A8MWS1 328 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 NPIPB9F8W1W9 429 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 FADS1O60427 444 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 FCMRO60667 390 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GCM2O75603 506 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 IL33O95760 270 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 ALOX5P09917 674 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 TFPTP0C1Z6 253 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 CYP4B1P13584 511 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 ETFAP13804 333 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 BMP5P22003 454 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 PRDX6P30041 224 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SOAT1P35610 550 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 PNLIPRP2P54317 469 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GPR85P60893 370 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 PPIAP62937 165 aaKnown RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 FOXO1Q12778 655 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 ZNF155Q12901 538 aaPredicted RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 CAPRIN1Q14444 709 aaKnown RBP9.89□□□□□ -0.83
NEDD8-204ENST00000526430 C6orf10Q5SRN2 563 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 HLA-DQA1Q5Y7H0 255 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 NANOGP8Q6NSW7 305 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 FIGNL1Q6PIW4 674 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 TRILQ7L0X0 811 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 NUP54Q7Z3B4 507 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GALNT10Q86SR1 603 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SLC22A16Q86VW1 577 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 TMEM156Q8N614 296 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 OR4C3Q8NH37 302 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SLC22A8Q8TCC7 542 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GPR151Q8TDV0 419 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 ASB15Q8WXK1 588 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SLC9A6Q92581 669 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 DIO2Q92813 273 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SARAFQ96BY9 339 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 LRRC58Q96CX6 371 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 RCN3Q96D15 328 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SLC35G5Q96KT7 338 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 BTBD2Q9BX70 525 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GSX2Q9BZM3 304 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 SAP130Q9H0E3 1048 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 NANOGQ9H9S0 305 aa9.89□□□□□ -0.83
NEDD8-204ENST00000526430 GMPR2Q9P2T1 348 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms