RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 ELOVL2Q9NXB9 296 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 GALPQ9UBC7 116 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 COPS7AQ9UBW8 275 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 MARCOQ9UEW3 520 aaPredicted RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 DIMT1Q9UNQ2 313 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 DHRS7Q9Y394 339 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 STRAPQ9Y3F4 350 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 DDX49Q9Y6V7 483 aaKnown RBP1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 U3KQV3 271 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 RPGRIP1LQ68CZ1 1315 aa1.11□□□□□ -2.23
ECHDC1-219ENST00000526299 BRWD3Q6RI45 1802 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 C5orf51A6NDU8 294 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 A8MUA0 341 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CLDN3O15551 220 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 MFN2O95140 757 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 TRIM16O95361 564 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 KLF8O95600 359 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 C6orf47O95873 294 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 ECDO95905 644 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 DCNP07585 359 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 STSP08842 583 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 MRPL3P09001 348 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 HMOX1P09601 288 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC35G4P0C7Q5 338 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 ADRB3P13945 408 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 H2AFXP16104 143 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 DESP17661 470 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 VDAC1P21796 283 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 SLC6A8P48029 635 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 PITPNBP48739 271 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CNN1P51911 297 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 APOC4P55056 127 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 HERV-K104P63124 156 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 HERVK_113P63132 956 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 ERVK-8P63133 956 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 NOP14P78316 857 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 SCGB2A2Q13296 93 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 DPYSQ14117 519 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 BTG3Q14201 252 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 EIF2B1Q14232 305 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 GK2Q14410 553 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 KCNJ11Q14654 390 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 PARP6Q2NL67 630 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CCDC184Q52MB2 194 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 PAGE3Q5JUK9 113 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 C12orf60Q5U649 245 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 PRAMEF7Q5VXH5 474 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 RAET1GQ6H3X3 334 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 LRRC8BQ6P9F7 803 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 SYT10Q6XYQ8 523 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CATSPER4Q7RTX7 472 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 GOLGA7Q7Z5G4 137 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 HMGN2P46Q86SG4 172 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 GPBP1Q86WP2 473 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CNTN4Q8IWV2 1026 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CENPSQ8N2Z9 138 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 ARRDC1Q8N5I2 433 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 LRRC17Q8N6Y2 441 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 CCNYQ8ND76 341 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 DUSP18Q8NEJ0 188 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 TMEM185AQ8NFB2 350 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 OR56B1Q8NGI3 324 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 DQX1Q8TE96 717 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 FCGR1BQ92637 280 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 RMI2Q96E14 147 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 C11orf24Q96F05 449 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 GPA33Q99795 319 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 ERVK-6Q9BXR3 956 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 MEPEQ9NQ76 525 aaPredicted RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 POLE3Q9NRF9 147 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 FARSBQ9NSD9 589 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 EPS15L1Q9UBC2 864 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM153AQ9UHL3 310 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 PIN4Q9Y237 131 aaKnown RBP1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 IFT52Q9Y366 437 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 MUC6Q6W4X9 2439 aa1.1□□□□□ -2.23
ECHDC1-219ENST00000526299 TRBV7-9A0A0J9YWB2 115 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 FAM230AA0A1W2PPH8 454 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 LRIT2A6NDA9 550 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 ZNF233A6NK53 670 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 C19orf81C9J6K1 198 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 H3BTX0 84 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 TLR4O00206 839 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 LGALS8O00214 317 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 VEGFDO43915 354 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 B3GALNT1O75752 331 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 IDH1O75874 414 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 REC8O95072 547 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 NDUFA7O95182 113 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 RETP07949 1114 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CALCBP10092 127 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 RRASP10301 218 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 THRBP10828 461 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 GNSP15586 552 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 CELP19835 753 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 PSMA2P25787 234 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 KIF5BP33176 963 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 BTDP43251 543 aa1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 SSR1P43307 286 aaKnown RBP1.09□□□□□ -2.23
ECHDC1-219ENST00000526299 EMDP50402 254 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms