RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 DPP10Q8N608 796 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 OR4K17Q8NGC6 315 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 RAB8BQ92930 207 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 ROPN1LQ96C74 230 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 AURKBQ96GD4 344 aaPredicted RBP9.21□□□□□ -0.94
VPS28-204ENST00000526054 SDF2Q99470 211 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 ZNF350Q9GZX5 532 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 SLC6A15Q9H2J7 730 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 POLE3Q9NRF9 147 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 UBQLN4Q9NRR5 601 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 FLRT3Q9NZU0 649 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 P2RX2Q9UBL9 471 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 LIPT1Q9Y234 373 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 C15orf41Q9Y2V0 281 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 KCNE3Q9Y6H6 103 aa9.21□□□□□ -0.94
VPS28-204ENST00000526054 A0A1W2PQD3 144 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 EVPLLA8MZ36 301 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ALG1L2C9J202 215 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 H3BNH8 94 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 HMGN4O00479 90 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 NDUFB5O43674 189 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 GUSBP08236 651 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 HOXB9P17482 250 aaPredicted RBP9.2□□□□□ -0.94
VPS28-204ENST00000526054 TBXA2RP21731 343 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ATP12AP54707 1039 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 GAS1P54826 345 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 DLX5P56178 289 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 DSTNP60981 165 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 STX5Q13190 355 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 CYLC2Q14093 348 aaPredicted RBP9.2□□□□□ -0.94
VPS28-204ENST00000526054 GNA13Q14344 377 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 TOMM20Q15388 145 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 GPAT3Q53EU6 434 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 COX20Q5RI15 118 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ARSKQ6UWY0 536 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ZAR1Q86SH2 424 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 MTDHQ86UE4 582 aaKnown RBP9.2□□□□□ -0.94
VPS28-204ENST00000526054 SNX32Q86XE0 403 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 PLCZ1Q86YW0 608 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 MISPQ8IVT2 679 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ULK2Q8IYT8 1036 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 PCYOX1LQ8NBM8 494 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 NEIL3Q8TAT5 605 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 OIT3Q8WWZ8 545 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 NTNG2Q96CW9 530 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 POLDIP3Q9BY77 421 aaKnown RBP9.2□□□□□ -0.94
VPS28-204ENST00000526054 FBXO34Q9NWN3 711 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 DNAJB12Q9NXW2 375 aaKnown RBP9.2□□□□□ -0.94
VPS28-204ENST00000526054 SLC25A37Q9NYZ2 338 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 CALML5Q9NZT1 146 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 VAPAQ9P0L0 249 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 ARMCX1Q9P291 453 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 WDR45Q9Y484 360 aa9.2□□□□□ -0.94
VPS28-204ENST00000526054 NF1P21359 2839 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 ANKHD1Q8IWZ3 2542 aaKnown RBP9.19□□□□□ -0.94
VPS28-204ENST00000526054 TRBV5-3A0A0A0MS03 114 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 C15orf38-AP3S2A0A0A6YYH1 394 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 NPIPA5A0A0B4J1W7 369 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 C2orf72A6NCS6 295 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 HSPB2A8KAH6 182 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 NPIPA7E9PJI5 369 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 DVL2O14641 736 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 MRASO14807 208 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 KIAA0513O60268 411 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 CTAG2O75638 210 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 CBR3O75828 277 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 TRAPPC6AO75865 159 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 DCTN3O75935 186 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 ANGPTL1O95841 491 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 C1QCP02747 245 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 NPIPA8P0DM63 369 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 NR2F1P10589 423 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 ETFAP13804 333 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 UQCRC1P31930 480 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 GCKP35557 465 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 PEX19P40855 299 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 KIR2DL3P43628 341 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 MVDP53602 400 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 IST1P53990 364 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 C17orf67Q0P5P2 114 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 FUT5Q11128 374 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 SNTB1Q13884 538 aaKnown RBP9.19□□□□□ -0.94
VPS28-204ENST00000526054 RGNQ15493 299 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 GPR68Q15743 365 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 HSPB2Q16082 182 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 TRMT5Q32P41 509 aaKnown RBP9.19□□□□□ -0.94
VPS28-204ENST00000526054 FNDC7Q5VTL7 733 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 REP15Q6BDI9 236 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 DLEU7Q6UYE1 221 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 FRRS1Q6ZNA5 592 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 LRRC74BQ6ZQY2 392 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 MARCH3Q86UD3 253 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 RETREG3Q86VR2 466 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 ZNF619Q8N2I2 560 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 ZNF614Q8N883 585 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 WDSUB1Q8N9V3 476 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 OR4C3Q8NH37 302 aa9.19□□□□□ -0.94
VPS28-204ENST00000526054 RP9Q8TA86 221 aaKnown RBP9.19□□□□□ -0.94
VPS28-204ENST00000526054 NINJ1Q92982 152 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms